Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq16 152 4e-31 seq13 152 4e-31 seq11 152 4e-31 seq7 152 4e-31 >seq16 Length=523121 Score = 152 bits (168), Expect = 4e-31 Identities = 560/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || ||||||| || ||||||| || ||||| || || || Sbjct 2810 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 2869 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 2870 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 2927 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902 || | || || || ||||| |||| ||| |||| || | ||| || |||| || Sbjct 2928 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 2985 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || | || ||||| || |||| || ||| |||| || ||| |||| ||| | Sbjct 2986 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 3045 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||| | || || | | |||||| ||||| | | || |||| | | ||| Sbjct 3046 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 3105 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| |||||||| | || || || || || || | ||| | Sbjct 3106 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 3165 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||||| || || | || |||| ||||| |||||||| || || || Sbjct 3166 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 3225 Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| || || | | ||| ||| | | ||||| |||||| || | | Sbjct 3226 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 3280 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | |||| || ||||||||||||||||| ||||| || | || || || || Sbjct 3281 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 3340 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315 |||||||| | ||| | |||| | | ||| | || | || ||| |||| | Sbjct 3341 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 3398 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 3399 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 3458 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || ||| || || ||| || || || || | ||||| || | | |||| Sbjct 3459 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 3518 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 ||||| | ||||| || || || || || || || || ||||||| | Sbjct 3519 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 3578 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| || |||||||| || || || || || ||||||||||| |||| Sbjct 3579 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 3638 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || | || ||||| || ||| | || || Sbjct 3639 ATGTTGACGCCAACGGTATTCTCAACGT 3666 >seq13 Length=686865 Score = 152 bits (168), Expect = 4e-31 Identities = 560/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || ||||||| || ||||||| || ||||| || || || Sbjct 662729 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 662670 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 662669 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 662612 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902 || | || || || ||||| |||| ||| |||| || | ||| || |||| || Sbjct 662611 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 662554 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || | || ||||| || |||| || ||| |||| || ||| |||| ||| | Sbjct 662553 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 662494 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||| | || || | | |||||| ||||| | | || |||| | | ||| Sbjct 662493 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 662434 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| |||||||| | || || || || || || | ||| | Sbjct 662433 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 662374 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||||| || || | || |||| ||||| |||||||| || || || Sbjct 662373 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 662314 Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| || || | | ||| ||| | | ||||| |||||| || | | Sbjct 662313 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 662259 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | |||| || ||||||||||||||||| ||||| || | || || || || Sbjct 662258 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 662199 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315 |||||||| | ||| | |||| | | ||| | || | || ||| |||| | Sbjct 662198 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 662141 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 662140 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 662081 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || ||| || || ||| || || || || | ||||| || | | |||| Sbjct 662080 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 662021 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 ||||| | ||||| || || || || || || || || ||||||| | Sbjct 662020 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 661961 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| || |||||||| || || || || || ||||||||||| |||| Sbjct 661960 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 661901 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || | || ||||| || ||| | || || Sbjct 661900 ATGTTGACGCCAACGGTATTCTCAACGT 661873 >seq11 Length=998753 Score = 152 bits (168), Expect = 4e-31 Identities = 560/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || ||||||| || ||||||| || ||||| || || || Sbjct 988093 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 988034 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 988033 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 987976 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902 || | || || || ||||| |||| ||| |||| || | ||| || |||| || Sbjct 987975 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 987918 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || | || ||||| || |||| || ||| |||| || ||| |||| ||| | Sbjct 987917 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 987858 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||| | || || | | |||||| ||||| | | || |||| | | ||| Sbjct 987857 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 987798 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| |||||||| | || || || || || || | ||| | Sbjct 987797 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 987738 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||||| || || | || |||| ||||| |||||||| || || || Sbjct 987737 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 987678 Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| || || | | ||| ||| | | ||||| |||||| || | | Sbjct 987677 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 987623 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | |||| || ||||||||||||||||| ||||| || | || || || || Sbjct 987622 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 987563 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315 |||||||| | ||| | |||| | | ||| | || | || ||| |||| | Sbjct 987562 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 987505 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 987504 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 987445 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || ||| || || ||| || || || || | ||||| || | | |||| Sbjct 987444 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 987385 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 ||||| | ||||| || || || || || || || || ||||||| | Sbjct 987384 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 987325 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| || |||||||| || || || || || ||||||||||| |||| Sbjct 987324 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 987265 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || | || ||||| || ||| | || || Sbjct 987264 ATGTTGACGCCAACGGTATTCTCAACGT 987237 >seq7 Length=1186048 Score = 152 bits (168), Expect = 4e-31 Identities = 560/868 (65%), Gaps = 22/868 (3%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || ||||||| || ||||||| || ||||| || || || Sbjct 868 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 927 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 928 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 985 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902 || | || || || ||||| |||| ||| |||| || | ||| || |||| || Sbjct 986 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 1043 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || | || ||||| || |||| || ||| |||| || ||| |||| ||| | Sbjct 1044 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 1103 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 ||||| | || || | | |||||| ||||| | | || |||| | | ||| Sbjct 1104 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 1163 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| |||||||| | || || || || || || | ||| | Sbjct 1164 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 1223 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||||| || || | || |||| ||||| |||||||| || || || Sbjct 1224 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 1283 Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| || || | | ||| ||| | | ||||| |||||| || | | Sbjct 1284 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 1338 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | |||| || ||||||||||||||||| ||||| || | || || || || Sbjct 1339 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 1398 Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315 |||||||| | ||| | |||| | | ||| | || | || ||| |||| | Sbjct 1399 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 1456 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 1457 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 1516 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 | || ||| || || ||| || || || || | ||||| || | | |||| Sbjct 1517 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 1576 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 ||||| | ||||| || || || || || || || || ||||||| | Sbjct 1577 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 1636 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| || |||||||| || || || || || ||||||||||| |||| Sbjct 1637 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 1696 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || | || ||||| || ||| | || || Sbjct 1697 ATGTTGACGCCAACGGTATTCTCAACGT 1724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293673081560