Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq16 152 4e-31
seq13 152 4e-31
seq11 152 4e-31
seq7 152 4e-31
>seq16
Length=523121
Score = 152 bits (168), Expect = 4e-31
Identities = 560/868 (65%), Gaps = 22/868 (3%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| || ||||||| || ||||| || || ||
Sbjct 2810 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 2869
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 2870 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 2927
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902
|| | || || || ||||| |||| ||| |||| || | ||| || |||| ||
Sbjct 2928 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 2985
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || | || ||||| || |||| || ||| |||| || ||| |||| ||| |
Sbjct 2986 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 3045
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | |||||| ||||| | | || |||| | | |||
Sbjct 3046 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 3105
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| | || || || || || || | ||| |
Sbjct 3106 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 3165
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| ||| | ||||| || || | || |||| ||||| |||||||| || || ||
Sbjct 3166 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 3225
Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| || || | | ||| ||| | | ||||| |||||| || | |
Sbjct 3226 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 3280
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | |||| || ||||||||||||||||| ||||| || | || || || ||
Sbjct 3281 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 3340
Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315
|||||||| | ||| | |||| | | ||| | || | || ||| |||| |
Sbjct 3341 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 3398
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 3399 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 3458
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
| || ||| || || ||| || || || || | ||||| || | | ||||
Sbjct 3459 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 3518
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
||||| | ||||| || || || || || || || || ||||||| |
Sbjct 3519 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 3578
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| || |||||||| || || || || || ||||||||||| ||||
Sbjct 3579 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 3638
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| | || ||||| || ||| | || ||
Sbjct 3639 ATGTTGACGCCAACGGTATTCTCAACGT 3666
>seq13
Length=686865
Score = 152 bits (168), Expect = 4e-31
Identities = 560/868 (65%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| || ||||||| || ||||| || || ||
Sbjct 662729 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGCATCTTTGAGGTCAAGGCCACC 662670
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 662669 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 662612
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902
|| | || || || ||||| |||| ||| |||| || | ||| || |||| ||
Sbjct 662611 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 662554
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || | || ||||| || |||| || ||| |||| || ||| |||| ||| |
Sbjct 662553 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 662494
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | |||||| ||||| | | || |||| | | |||
Sbjct 662493 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 662434
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| | || || || || || || | ||| |
Sbjct 662433 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 662374
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| ||| | ||||| || || | || |||| ||||| |||||||| || || ||
Sbjct 662373 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 662314
Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| || || | | ||| ||| | | ||||| |||||| || | |
Sbjct 662313 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 662259
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | |||| || ||||||||||||||||| ||||| || | || || || ||
Sbjct 662258 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 662199
Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315
|||||||| | ||| | |||| | | ||| | || | || ||| |||| |
Sbjct 662198 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 662141
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 662140 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 662081
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
| || ||| || || ||| || || || || | ||||| || | | ||||
Sbjct 662080 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 662021
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
||||| | ||||| || || || || || || || || ||||||| |
Sbjct 662020 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 661961
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| || |||||||| || || || || || ||||||||||| ||||
Sbjct 661960 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 661901
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| | || ||||| || ||| | || ||
Sbjct 661900 ATGTTGACGCCAACGGTATTCTCAACGT 661873
>seq11
Length=998753
Score = 152 bits (168), Expect = 4e-31
Identities = 560/868 (65%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| || ||||||| || ||||| || || ||
Sbjct 988093 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 988034
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 988033 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 987976
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902
|| | || || || ||||| |||| ||| |||| || | ||| || |||| ||
Sbjct 987975 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 987918
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || | || ||||| || |||| || ||| |||| || ||| |||| ||| |
Sbjct 987917 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 987858
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | |||||| ||||| | | || |||| | | |||
Sbjct 987857 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 987798
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| | || || || || || || | ||| |
Sbjct 987797 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 987738
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| ||| | ||||| || || | || |||| ||||| |||||||| || || ||
Sbjct 987737 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 987678
Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| || || | | ||| ||| | | ||||| |||||| || | |
Sbjct 987677 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 987623
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | |||| || ||||||||||||||||| ||||| || | || || || ||
Sbjct 987622 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 987563
Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315
|||||||| | ||| | |||| | | ||| | || | || ||| |||| |
Sbjct 987562 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 987505
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 987504 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 987445
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
| || ||| || || ||| || || || || | ||||| || | | ||||
Sbjct 987444 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 987385
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
||||| | ||||| || || || || || || || || ||||||| |
Sbjct 987384 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 987325
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| || |||||||| || || || || || ||||||||||| ||||
Sbjct 987324 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 987265
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| | || ||||| || ||| | || ||
Sbjct 987264 ATGTTGACGCCAACGGTATTCTCAACGT 987237
>seq7
Length=1186048
Score = 152 bits (168), Expect = 4e-31
Identities = 560/868 (65%), Gaps = 22/868 (3%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| || ||||||| || ||||| || || ||
Sbjct 868 GGAACTTTTGATGTCTCTCTTCTGTCCATCGAAGACGGMATCTTTGAGGTCAAGGCCACC 927
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 928 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 985
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAG--CTCTTCG 551902
|| | || || || ||||| |||| ||| |||| || | ||| || |||| ||
Sbjct 986 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGAT--ATCTCCACCAACCAGAGAGCTCTCCG 1043
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || | || ||||| || |||| || ||| |||| || ||| |||| ||| |
Sbjct 1044 ACGACTGCGGACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCCGCTCAGACCTC 1103
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
||||| | || || | | |||||| ||||| | | || |||| | | |||
Sbjct 1104 CATTGAGATCGACTCTCTCTATGAGGGTATTGACTTCTACACCTCTATCACCCGAGCCCG 1163
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| | || || || || || || | ||| |
Sbjct 1164 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGGGGCACCATCGATCCCGTCGAGAAGGTTCT 1223
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| ||| | ||||| || || | || |||| ||||| |||||||| || || ||
Sbjct 1224 GACCGATGCCAAGATGGACAAGGGCTCTGTTAATGAGATTGTCCTTGTTGGAGGTTCCAC 1283
Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| || || | | ||| ||| | | ||||| |||||| || | |
Sbjct 1284 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAATGGCAAGGAGCTG 1338
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | |||| || ||||||||||||||||| ||||| || | || || || ||
Sbjct 1339 AACCGATCTATTAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATC 1398
Query 552258 CTTTCTGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTC 552315
|||||||| | ||| | |||| | | ||| | || | || ||| |||| |
Sbjct 1399 CTTTCTGGTGACACT--TCCTCTTCTACCCAGGACATTCTGCTCCTCGACGTTGCTCCCC 1456
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 1457 TGTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 1516
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
| || ||| || || ||| || || || || | ||||| || | | ||||
Sbjct 1517 CCATCCCTACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGATAACCAGCCCGGTGTTC 1576
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
||||| | ||||| || || || || || || || || ||||||| |
Sbjct 1577 TGATTCAGGTCTTTGAGGGTGAGCGAGCCCAGACCAAGGACAACAACATTCTTGGTAAGT 1636
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| || |||||||| || || || || || ||||||||||| ||||
Sbjct 1637 TTGAGCTTTCTGGTATCCCCCCTGCTCCCCGAGGTGTTCCTCAGATTGAAGTTACCTTCG 1696
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| | || ||||| || ||| | || ||
Sbjct 1697 ATGTTGACGCCAACGGTATTCTCAACGT 1724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029293673081560
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