Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq10 210 2e-49
>seq10
Length=1040050
Score = 210 bits (232), Expect = 2e-49
Identities = 410/605 (68%), Gaps = 22/605 (4%)
Strand=Plus/Plus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
|||||| | |||||||||||| ||| ||||| ||||| |||| ||||||||| | |||
Sbjct 846390 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTC 846449
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
|| || || | || || || || ||||| ||| | |||| ||| ||| ||
Sbjct 846450 GCCGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAAT 846509
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 29978
||| ||||| ||||| || |||| ||| | |||| |||||| ||||| ||||| || |
Sbjct 846510 GTTGAAGGGCACCCCCAGTCCCAGGTCACAGGACCGCTGGTACAGCTGGCACGACAGTTG 846569
Query 29979 TCCGTCGCTC------------------ACGTAAAACTGACACATGGTGTGGCACGGAGG 30020
||| | || ||||| |||||||| | ||||||| |||||
Sbjct 846570 GCCGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAGG 846629
Query 30021 AAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 30080
|||||||| | | || |||||||| || ||| ||||| || | ||| |
Sbjct 846630 CAGAGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCTG 846689
Query 30081 TGGGTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 30139
|||||| | ||| ||| || | | | || |||||||||||| ||| |||| ||
Sbjct 846690 AGGGTTGGTTTTGA-GAGTGTGAATCACCTGTTTCAGCTGATCCACGCCCTGGCCCGTGT 846748
Query 30140 AGTCTG-CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30198
|||||| | || |||| ||||||||||||||||||| | ||| || || ||||| ||
Sbjct 846749 AGTCTGTGTCGCA-GTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAGACG 846807
Query 30199 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30258
|||||||| || || ||| | ||| | | || ||| |||| ||| || ||||
Sbjct 846808 GGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTTGGAT 846867
Query 30259 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 30318
|| ||| |||||||||| | | |||||| || | ||| || ||| ||||
Sbjct 846868 CCATTGCCGTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTCTTGCCGTCAGTGCACCCG 846927
Query 30319 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 30378
|| ||||||| |||||||||| ||| || ||||||||| || || || |
Sbjct 846928 GCCACAAACCACAAAAGCTCCTCCAACACGCCCCGGTAAAAGACCCGTTTTGTGGTCAAC 846987
Query 30379 AGGGG 30383
|||||
Sbjct 846988 AGGGG 846992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617380878812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |