Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq24 320 3e-82
seq3 291 2e-73
seq1 104 4e-17
>seq24
Length=170883
Score = 320 bits (354), Expect = 3e-82
Identities = 965/1462 (66%), Gaps = 41/1462 (3%)
Strand=Plus/Minus
Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486
|||||||||||||||| |||||| ||||||| |||||||||||| ||| ||||
Sbjct 96537 CGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGG 96478
Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546
| | ||||| | ||| ||||||||| ||||| || || | | | || || | |
Sbjct 96477 GAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGAT 96418
Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
||| | ||||||| || || || ||||| || |||| |||||| | ||
Sbjct 96417 GTCGCATGTTGGACTTCTTTGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGT 96358
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
||||||| | |||||||| | | ||| |||||||| | | | | | | |
Sbjct 96357 TGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGT 96298
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
| | |||| | ||| | ||||| | | ||||||| | ||||||||| || |
Sbjct 96297 TGGTGTCGTC-TCGAGTG-----ACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAA 96244
Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786
| |||||||| || | |||| | ||||| || |||||| ||||||
Sbjct 96243 CAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGA 96184
Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846
|||| || |||| || || || ||||| || ||| ||| |||||||||||||| ||||
Sbjct 96183 TGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGG 96124
Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCACC 221905
| || | ||| ||| | ||||| | || ||| || | ||||| || |
Sbjct 96123 GGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT-TCTGGGCGGGGATG 96065
Query 221906 GTCCTCTTGACTGCA-CCCTCGGTCTTTTCATAC--CCGGTATAGA-GCATGTCAAACTT 221961
|| | | ||| | ||||| ||| || ||| | ||| || || || ||||
Sbjct 96064 GTTCG-TCGACCTCGGCCCTC---CTTCTCGTACTGCTCGTACAGCTGCTTG---AACTC 96012
Query 221962 TTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTT 222021
|| ||||| | |||||||| || |||||| | ||| ||||| ||| |||| |
Sbjct 96011 GTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGC 95952
Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081
||| | | ||| | || |||||| || || ||||||||||| ||| | || || ||||
Sbjct 95951 GTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCG 95892
Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141
|| || ||||||| |||| ||| || | ||| || | ||||| || ||||| |
Sbjct 95891 GGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTC 95832
Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
|||||| ||||| || || | ||| | || ||||||||||||||||| ||||| |||||
Sbjct 95831 GTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCAC 95772
Query 222202 -CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCG 222259
||| ||| | |||| ||| || || | || || | |||||||| |||
Sbjct 95771 GTATC--GGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCG 95714
Query 222260 TTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCA 222319
|||||||| |||||| | ||| ||| | | ||| | || | ||||||||
Sbjct 95713 TTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCG 95654
Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379
|| || || || |||| || ||| ||||||| || || |||||| || || |||
Sbjct 95653 CCAGCAGACTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAG 95594
Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTA 222439
|| ||||| | ||| | || ||||| ||||||||||| | | || || | |||||
Sbjct 95593 TCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTG 95534
Query 222440 AACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACG 222499
| || ||||| ||||| |||||||| | |||||| | ||| ||||| | |
Sbjct 95533 TAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATG 95474
Query 222500 ACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGC 222559
||| ||| |||| ||| ||||| || | || || |||| ||| | ||||||
Sbjct 95473 GCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414
Query 222560 CTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616
| || | |||| || ||| || | | |||||| | | ||||| || || ||
Sbjct 95413 CGCTCGGCAACAGCTCCGTTG--ACTCG-CAACAGGTATGCTCGCTCCAGGGTTTTAAAG 95357
Query 222617 CCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC--CGAC 222673
|||||||||||| |||| ||||||| | ||| | | |||| ||| ||||| || |
Sbjct 95356 CCAAAGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCGCCGTTGAGCTCGTCGGC 95298
Query 222674 -TTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGT 222732
|| || ||| | ||| | | || ||||| | ||| | | || | | ||
Sbjct 95297 GTTCGACTGGACGGT---GTCGTACAGCTCCTTGGACACCATGGGTGAATGCT-TCTTGT 95242
Query 222733 GTCG-GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTCGGGAGTC 222790
||| || || |||| |||||| || | | | | | || ||| | || | |||
Sbjct 95241 TTCGAGGATTCACGTAGTGGTAGAGGTCATAGACCACCTGCGAAAACTGCTTCTTG-GTC 95183
Query 222791 TGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACG 222850
|| |||||||| || ||||||||||| || | |||| || | ||||| || ||||
Sbjct 95182 TGTTTGTGCAGGTTGGACACGGCGATTCGGGCAGCCAGAATGGCGTAGTCGGGATGCAGA 95123
Query 222851 GTGGTCATGCTGGCTAGGGTCT 222872
||||||||| ||| |||||
Sbjct 95122 GTGGTCATGTAGGCGGCGGTCT 95101
>seq3
Length=1361780
Score = 291 bits (322), Expect = 2e-73
Identities = 585/863 (68%), Gaps = 30/863 (3%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| || ||| ||||||||||||||||| | || |||||| || || ||||| |||
Sbjct 14358 GAGATCTGGCAGATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATCGAT 14417
Query 25534 CTGGCCAAGGACATGGACGGCTGGTA----CG-CTCTATCCAAAGACGAGCAGCATTTTC 25588
|| | ||||||||||| || |||| | || ||| | ||| ||||||| | | |||
Sbjct 14418 CTCGGCAAGGACATGGGCGACTGGGAGAACCGACTCAA--CAACGACGAGC-GATTCTTC 14474
Query 25589 -TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGC 25647
|| |||| |||| |||||||| ||||| || || || || |||||||| |||
Sbjct 14475 ATCTCTCACGTTCTGGCCTTCTTTGCTGCCTCCGACGGAATCGTCAACGAGAACCTGGTG 14534
Query 25648 GAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707
||| ||||| || | || || ||| ||||||||||| |||||||| ||||||||
Sbjct 14535 GAGCGATTCTCCGGCGAGGTCCAGGCTCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATC 14594
Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764
|| || || | ||||| || || | ||| || || || ||||| |
Sbjct 14595 ATGATGGAGAACATCCACTCGGAAACCTACTC---GCTGCTCATCGACACATACATCAAG 14651
Query 25765 GACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824
||| | ||| || | ||||| ||||||||| ||| ||| ||||||||| |
Sbjct 14652 GACCCCAAGGAGCGAAACTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAG 14711
Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTG 25884
||||| ||||| | |||||||| | | || | || ||||||||||||||
Sbjct 14712 AAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGAGTCCACCTTTGGCGAGCGGCTC 14771
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
| |||||||| || || ||||| ||||||||| || || || || |||||||||||
Sbjct 14772 ATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTCCATCTTCTGG 14831
Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004
|||||| || || ||||||||| || ||| |||||||||||||| | |||
Sbjct 14832 CTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCTCGAGAC 14891
Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA---A 26061
|||||||| |||| || |||||||| ||||||| | | ||| ||| | || |
Sbjct 14892 GAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTC---TCAC---CTCGAGAACCGA 14945
Query 26062 CCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120
|| || |||| ||| ||| | |||| |||||||| | |||||| |||||||
Sbjct 14946 CCCTC-CAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCAGGAGTT 15004
Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATA 26180
| | ||||||||| || |||||| |||| ||
Sbjct 15005 CCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCATGAACGCCAAGCTCATGTGCCAGTA 15064
Query 26181 CATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGT 26238
|||||||| ||| ||||||| |||||| ||| || || | ||| ||||||
Sbjct 15065 CATTGAGTTTGTCGCCGACCGACTGCTGGTTGC--TCTCGGCAACACCAAGGTCTACAAC 15122
Query 26239 ACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298
| | ||||| |||||||| ||||| ||||| || ||| || ||||||||||||||
Sbjct 15123 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCAACTTCTTC 15182
Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321
|| ||| | ||| |||||| ||
Sbjct 15183 GAGAAGCGAGTCTCCGACTACCA 15205
>seq1
Length=2434256
Score = 104 bits (114), Expect = 4e-17
Identities = 132/178 (74%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 222026 TCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTC-TGG 222083
||||| ||| |||| |||||| || || || | ||| | || | ||||||||| | ||
Sbjct 1213653 TCTTTCGACTCTCTTCATGAACAGATCGGGAACCCATAATGCGTAAAAGAGATCACGTGC 1213712
Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143
|| | | ||||| | |||| |||||| | ||||| ||| || || ||||| || || |
Sbjct 1213713 TCTGTTT-TCCTCGGCTCCGTGGTTTTTGCGCAGATTCAAGAAATCCAAAATATCCGCAT 1213771
Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
|||| ||||||| ||||| || | || || || ||||||||||| || || |||||
Sbjct 1213772 GCCATGGCTCCAAGTAGACTGCAAACGCTCCAGGACGCTTGTTGCCGCCTTGGTCCAC 1213829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844289135360
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