Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq24 246 4e-60 seq3 145 9e-30 >seq24 Length=170883 Score = 246 bits (272), Expect = 4e-60 Identities = 1149/1794 (64%), Gaps = 59/1794 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| ||||||| || | |||| |||||||| || ||||||| | | Sbjct 95415 CCCCAGCAGATGATCATGCGAGTGTCCGTCGGAATCCACGGTGACGACATTGCCCGAGCC 95474 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | ||||| || | ||| || | ||||| | || ||||||| Sbjct 95475 ATCGAGACCTACAACTACATGTCTCAGAAGTACTTT-ACCCACGCTTCCCCCACCCTCTA 95533 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||| || || || |||||||| || |||||| || || ||||| || Sbjct 95534 CAACGCTGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGA 95593 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| ||| |||| ||||| | || || | | ||||| | || || |||| ||||| Sbjct 95594 CTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTGATTTCCAAGTCTGCTGG 95653 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | |||||| | | |||||| || ||| || || || Sbjct 95654 CGGTATCGGTCTCTCCATCCACAACATCCGAGCCACCGGCTCCTACATTGCCGGCACCAA 95713 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | ||||| | || ||||| || || | ||| ||| || || || || Sbjct 95714 CGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACTGCCCGATACGT 95773 Query 75571 AAATCAAGCGGGGCGTC--GCAAG--GGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 | || | | ||| | || | || || | || | ||| | || || ||||| | Sbjct 95774 GGACCAGG-GAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTTGAGCCCTGGCACG 95832 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 ||| ||| | |||||| ||| | ||| ||||| || | || ||| ||| Sbjct 95833 ACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAGGAGATTCGAGCCC 95892 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 |||| || || |||||||||| || || || |||||| |||| || ||| || | Sbjct 95893 GAGACCTGTTCCTGGCCCTGTGGATCCCCGATCTGTTCATGGAGCGAGTCGAGCAGAACG 95952 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | ||| |||| | || || || || || ||||| ||||| || || | Sbjct 95953 CCGAGTGGACTCTCATGTGCCCCAACGAGTGTCCCGGTCTGGACGACGTCTACGGCGACG 96012 Query 75807 AGTTTGAAGCC-CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 |||| |||| || ||| |||| || ||||||| ||| |||| | |||| Sbjct 96013 AGTTC-AAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGT----CGAC-GAACCA 96066 Query 75866 GCC--GCC--GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || ||| || | | ||| | |||||| | | ||||| ||| | || | || | Sbjct 96067 TCCCCGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGTAACCCCT 96126 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 ||||| |||||||||||||| ||| ||| ||||| ||||| | ||||| |||| Sbjct 96127 TCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACCATCA 96186 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || || || || ||| || ||| | |||||| | | |||||| |||||||| Sbjct 96187 AGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTCTTCTCCCGATGAGGTGGCTGTTT 96246 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTTT--- 76096 |||| |||| || || ||||| || | | ||||| | ||| ||| | ||| | Sbjct 96247 GCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCACTCGAGACGACACCAACTCCTTCT 96306 Query 76097 --GATTATGAAAAACTTCATGAAATCAC-AAAG--ATTGTTACCAAAAATCTAAACCGAG 76151 || | | || || || || ||| | |||| ||||| ||| || ||| Sbjct 96307 ACGACTTCAAGAAGCTGCACGATATCGCCAAAGTCATTGTGCG---AAACCTCAACGCCA 96363 Query 76152 TCATTGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACA 76208 | || ||| |||| | || |||||| ||| | | ||||| || |||||||| Sbjct 96364 TTATCGACCGAAACTACTACCCCGTTCCCGAGGCAAAG---AAGTCCAACATGCGACATC 96420 Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACGCA 76267 ||||||||| | |||||||||| ||||| || || || || | ||| || | | Sbjct 96421 GACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTCATGGCTCTGCGACTTCCC- 96479 Query 76268 TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCA 76327 ||||| || | || |||||| || | || | ||||| || ||||| || |||| | Sbjct 96480 TTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGA 96539 Query 76328 TCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGT 76387 || | ||||| || || ||||| | | ||| |||| ||||| || |||| Sbjct 96540 GCCGTCGAGGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGC 96599 Query 76388 TCTCCCGCGTCCCAAGGGGTG--CTTCAGTTTGATATGTGGGAAGGTGA----AACCAAG 76441 ||||| || ||| ||||| | ||||||||||| ||| |||| |||| || || Sbjct 96600 TCTCCTGCCTCC--AGGGGAGACCTTCAGTTTGACCTGT-GGAACGTGACTCCCTCCGAG 96656 Query 76442 CTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 || | || ||||| | ||| |||| |||| | ||| ||| | || ||| Sbjct 96657 CT---TTGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACCGGTATGCGAAACTCG 96713 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 || || | || || ||||| || ||||||||| | || || | || || || ||| Sbjct 96714 CTGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTCGGCTTCAACGAGTGC 96773 Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621 || || || ||||| | ||||| ||| || || || || || ||||| ||| Sbjct 96774 TTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTGGCGAGTTCCAGATT 96833 Query 76622 GTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 |||||| || |||| ||||| || ||||||| ||| || |||||| Sbjct 96834 GTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAATGAGACCATGAAG 96893 Query 76682 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATC 76741 | | || ||| | || ||| | || || ||| | | ||||| | || ||| Sbjct 96894 AACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC 96953 Query 76742 AAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCA 76801 ||| | || ||||| || |||||||| || | ||| |||| || ||||| || Sbjct 96954 AAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCGAATCATCGAGATGGCTGCC 97013 Query 76802 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG--TCC 76857 || || | ||||||||| | |||| ||| | || ||||| ||| || Sbjct 97014 GACCGATCGCCCTTCATTGACC--AGTCCCAGTCCCTCAA--CATTCACATCAAGGACCC 97069 Query 76858 AACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGG 76917 || ||| ||||||| | || ||||| | |||| ||||| |||| ||||| || || Sbjct 97070 CACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACTGG 97129 Query 76918 AATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCAGCCTTGA 76971 |||||||| || ||| | | ||| ||| || || ||||||| | |||| Sbjct 97130 TATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCACCATTGA 97183 >seq3 Length=1361780 Score = 145 bits (160), Expect = 9e-30 Identities = 349/520 (67%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| | || ||| || | Sbjct 14682 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATTTCC 14741 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 || | | || | |||| | |||||| || |||| ||||| || ||||||||||| Sbjct 14742 GACGAGGAGTC-CACCTTTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTT 14800 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 ||||| || || ||| | | || | ||| | |||||||| ||||||||||| ||||| Sbjct 14801 TTTCTCAGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCT 14860 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234 |||||| || || || ||||| ||||| |||||||| ||| || |||||| Sbjct 14861 CACCTTCTCCAACGAGCTCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCT 14920 Query 65235 GCTCTTC-AAGACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293 ||||||| || | | | || ||||| | | | | | || | | | || | | Sbjct 14921 GCTCTTCTCTCACCTCGAG-AACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCG 14979 Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353 |||| |||| || ||| | | |||| | ||||| || || ||| ||| |||| | Sbjct 14980 AGGCTGTTGGCATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGTGGTCTGCTCGGCA 15039 Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413 ||||| | || |||| | |||||||||||| ||| | || || || || | Sbjct 15040 TGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGACTGCT------GG 15093 Query 65414 TTGGGGT--GCCAC-CCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACA 65467 ||| | || || ||| | | ||| | | || || || ||||| ||||| |||| Sbjct 15094 TTGCTCTCGGCAACACCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACA 15153 Query 65468 TTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507 | || | || |||||||||||||| ||||||||||| Sbjct 15154 TCTCTCTGGCCGGTAAGACCAACTTCTTCGAGAAGCGAGT 15193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569271886720