Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq24 143 8e-29 seq1 140 1e-27 seq2 89.7 2e-12 >seq24 Length=170883 Score = 143 bits (158), Expect = 8e-29 Identities = 571/883 (65%), Gaps = 23/883 (3%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| ||||||||||| ||| ||||||||| || | ||||||||||| Sbjct 96221 GTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTCCGAGGTTCTTCTGGTT 96162 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || | ||| |||||||||||||| || ||| | ||| | || | ||| |||| Sbjct 96161 GGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCA 96102 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCG 155808 ||| ||||| | ||| || | |||| | | | | || | || ||| ||| Sbjct 96101 GTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGA-TGGTTCGTCGACCTCGGCCCTCCT 96043 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| || | | |||||| | | || || ||||| || ||| || || | Sbjct 96042 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGACGTCGTCCAGACCGGGAC 95983 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927 ||| | |||||| | || | || | | | | | | || |||||||| || | | Sbjct 95982 ACTCGTTGGGGCACATGAGAGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGA 95924 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985 || ||| | || ||| ||||| | || | || |||||| | ||||| | Sbjct 95923 TCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGC--TCGAATCTCCTCCTTTCCGTGGT 95866 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || ||||| |||| || || || || ||||| || ||||| |||| Sbjct 95865 TCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCTCAAGGTACATGGCAA 95806 Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | || | | | | ||||| ||||| || || || || ||||| || ||| |||||| Sbjct 95805 AGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCACGTATCGGGCAGTGTTGTTGTAGACAC 95746 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 ||||| || | ||||| ||||| || || ||||| ||| ||| | || || | | Sbjct 95745 GCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGGCAATGTAGGAGCCGGTGG 95686 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 || | || || || || || ||||| || | | || ||||| |||| || Sbjct 95685 CTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGACTTGGAAATCAGAGCACAGG 95626 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCA 156280 ||| | |||| | | || || || || || || || | || |||| | || | || Sbjct 95625 TCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACA--AGGAAACA 95568 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 ||| | || || | || |||||||||||| | || || || | || || |||| Sbjct 95567 CGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGTGGGGGAAGCGTGGGTAAA 95508 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG--AT-TAGAC-CCGT 156396 ||||| | |||||| || | ||| ||||| | ||| | || | | | |||| Sbjct 95507 GTACTTCTGAGACATGTAGTTGTAGGTCTCGAT----GGCTCGGGCAATGTCGTCACCGT 95452 Query 156397 GAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAA 156456 | || | || || || | ||| ||| ||||| || ||||| ||| |||| | | Sbjct 95451 GGATTCCGACGGACACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCTCCGTTGA 95392 Query 156457 TTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 ||||| |||||||| || ||||| |||||||| || || || Sbjct 95391 CTCGCAACAGGTATGCTCGCTCCAGGGTTTTAAAGCCAAAGTA 95349 >seq1 Length=2434256 Score = 140 bits (154), Expect = 1e-27 Identities = 381/573 (66%), Gaps = 18/573 (3%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 |||||| |||| | | ||||||| ||||| || || || ||||| |||| | Sbjct 1009766 ACACACGTGGATTCGGAAAGCATCTGATGCCTCCATCAGTCGCTCCTTGAGGAAGGCGGC 1009707 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 || || || | |||||||||||| ||||||||||| ||||| || |||||||| || || Sbjct 1009706 GGCTCCATGGGCAATCATACAATCTCGCTCCATTTCTCCGAATCGCAGACCACCCTCTCG 1009647 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG--CGGCTA 251601 || | ||||||| | ||||| || || ||| | | |||||| | ||| ||| Sbjct 1009646 AGATCGACCCTCGACGGGCTGTCGGGTCAGAATCTGGACAGGACC--TCGAGCTCGGGCG 1009589 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 || ||| || | |||||||| |||||||||||| | | ||| || | ||| | Sbjct 1009588 TGGATCTTGTCGTCCACCATATGTCGCAGACGCTGGTAGTAAGTGGGTCCCAGGAA-ACA 1009530 Query 251662 CTCGAAGGC---ATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718 || | | | || | || ||||| || ||| ||||| || ||| ||| ||| Sbjct 1009529 CTGG--GCCATAATCTTCTTACCAGTGTGACCGTGGTACATGACCTCGAATCCTCGAGAC 1009472 Query 251719 TCATAACC---AAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAA 251775 | || || | | | | |||| || | ||| | | | | | | | | ||| Sbjct 1009471 TGGTAGCCGTGAGATCGCAGCAGCT-TG--GAAATGGCGTCGACAGTCACATCGGTGAAA 1009415 Query 251776 CTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835 ||| |||| || | ||||| || | |||| ||| | || ||| || Sbjct 1009414 GGGGTAGCGTCACCCTCCAGACCAGACAGACACGACACCTTGGACAGCAGACACTCAATC 1009355 Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 | ||||| | |||||||| |||||| || ||||| ||||||||||| ||||| Sbjct 1009354 AAATGGGCCACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGGACA 1009295 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954 | ||| ||||||| |||||||||||||| | || |||| | ||||| || ||||| Sbjct 1009294 ACTCCCTCAGCAGAGAAGGGCATATCCTCGT-GTCGATAAGTCACACCAATGGTACCCTT 1009236 Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||||| ||||| || ||||| Sbjct 1009235 CTGTCCGTGACGAGAGGCAAACTTGTCTCCAAT 1009203 >seq2 Length=1754098 Score = 89.7 bits (98), Expect = 2e-12 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || |||| | ||||| |||||| ||||||||||| || | ||| ||||||||||| ||| Sbjct 1240709 GCTCCGTAAGCAATCACACAATCTCGCTCCATTTCTCCCAGACGCAGACCACCATCTCGA 1240768 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | | ||| |||| ||||| ||||||||| | |||||| || || ||| Sbjct 1240769 GATCGACCTTCGGTGGGCTGTCGAGTGAGAACCGCTCGAGGACCTCGGGGTCGAGCATGC 1240828 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 ||| || | |||||||||||||| ||||||| | ||| || | ||| ||| Sbjct 1240829 ATCTTGTCCATGACCATATGCTTGAGCTTCTGGTAGTAGATGGGGCCAAAGAAAATG 1240885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816770262828