Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq24 143 8e-29
seq1 140 1e-27
seq2 89.7 2e-12
>seq24
Length=170883
Score = 143 bits (158), Expect = 8e-29
Identities = 571/883 (65%), Gaps = 23/883 (3%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| ||||||||||| ||| ||||||||| || | |||||||||||
Sbjct 96221 GTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTCCGAGGTTCTTCTGGTT 96162
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || | ||| |||||||||||||| || ||| | ||| | || | ||| ||||
Sbjct 96161 GGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCA 96102
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCG 155808
||| ||||| | ||| || | |||| | | | | || | || ||| |||
Sbjct 96101 GTCGAGAATGTGGTACCACAGCTTCTGGGCGGGGA-TGGTTCGTCGACCTCGGCCCTCCT 96043
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | | |||||| | | || || ||||| || ||| || || |
Sbjct 96042 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGACGTCGTCCAGACCGGGAC 95983
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927
||| | |||||| | || | || | | | | | | || |||||||| || | |
Sbjct 95982 ACTCGTTGGGGCACATGAGAGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGA 95924
Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985
|| ||| | || ||| ||||| | || | || |||||| | ||||| |
Sbjct 95923 TCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGC--TCGAATCTCCTCCTTTCCGTGGT 95866
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| || ||||| |||| || || || || ||||| || ||||| ||||
Sbjct 95865 TCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCTCAAGGTACATGGCAA 95806
Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
| || | | | | ||||| ||||| || || || || ||||| || ||| ||||||
Sbjct 95805 AGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCCACGTATCGGGCAGTGTTGTTGTAGACAC 95746
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
||||| || | ||||| ||||| || || ||||| ||| ||| | || || | |
Sbjct 95745 GCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGGCAATGTAGGAGCCGGTGG 95686
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222
|| | || || || || || ||||| || | | || ||||| |||| ||
Sbjct 95685 CTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGACTTGGAAATCAGAGCACAGG 95626
Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCA--TTGATAGTAGATAGCA 156280
||| | |||| | | || || || || || || || | || |||| | || | ||
Sbjct 95625 TCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACA--AGGAAACA 95568
Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340
||| | || || | || |||||||||||| | || || || | || || ||||
Sbjct 95567 CGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGTGGGGGAAGCGTGGGTAAA 95508
Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG--AT-TAGAC-CCGT 156396
||||| | |||||| || | ||| ||||| | ||| | || | | | ||||
Sbjct 95507 GTACTTCTGAGACATGTAGTTGTAGGTCTCGAT----GGCTCGGGCAATGTCGTCACCGT 95452
Query 156397 GAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAA 156456
| || | || || || | ||| ||| ||||| || ||||| ||| |||| | |
Sbjct 95451 GGATTCCGACGGACACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCTCCGTTGA 95392
Query 156457 TTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
||||| |||||||| || ||||| |||||||| || || ||
Sbjct 95391 CTCGCAACAGGTATGCTCGCTCCAGGGTTTTAAAGCCAAAGTA 95349
>seq1
Length=2434256
Score = 140 bits (154), Expect = 1e-27
Identities = 381/573 (66%), Gaps = 18/573 (3%)
Strand=Plus/Minus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
|||||| |||| | | ||||||| ||||| || || || ||||| |||| |
Sbjct 1009766 ACACACGTGGATTCGGAAAGCATCTGATGCCTCCATCAGTCGCTCCTTGAGGAAGGCGGC 1009707
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
|| || || | |||||||||||| ||||||||||| ||||| || |||||||| || ||
Sbjct 1009706 GGCTCCATGGGCAATCATACAATCTCGCTCCATTTCTCCGAATCGCAGACCACCCTCTCG 1009647
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG--CGGCTA 251601
|| | ||||||| | ||||| || || ||| | | |||||| | ||| |||
Sbjct 1009646 AGATCGACCCTCGACGGGCTGTCGGGTCAGAATCTGGACAGGACC--TCGAGCTCGGGCG 1009589
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
|| ||| || | |||||||| |||||||||||| | | ||| || | ||| |
Sbjct 1009588 TGGATCTTGTCGTCCACCATATGTCGCAGACGCTGGTAGTAAGTGGGTCCCAGGAA-ACA 1009530
Query 251662 CTCGAAGGC---ATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718
|| | | | || | || ||||| || ||| ||||| || ||| ||| |||
Sbjct 1009529 CTGG--GCCATAATCTTCTTACCAGTGTGACCGTGGTACATGACCTCGAATCCTCGAGAC 1009472
Query 251719 TCATAACC---AAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAA 251775
| || || | | | | |||| || | ||| | | | | | | | | |||
Sbjct 1009471 TGGTAGCCGTGAGATCGCAGCAGCT-TG--GAAATGGCGTCGACAGTCACATCGGTGAAA 1009415
Query 251776 CTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835
||| |||| || | ||||| || | |||| ||| | || ||| ||
Sbjct 1009414 GGGGTAGCGTCACCCTCCAGACCAGACAGACACGACACCTTGGACAGCAGACACTCAATC 1009355
Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895
| ||||| | |||||||| |||||| || ||||| ||||||||||| |||||
Sbjct 1009354 AAATGGGCCACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGGACA 1009295
Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954
| ||| ||||||| |||||||||||||| | || |||| | ||||| || |||||
Sbjct 1009294 ACTCCCTCAGCAGAGAAGGGCATATCCTCGT-GTCGATAAGTCACACCAATGGTACCCTT 1009236
Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|||||||||||||| ||||| || |||||
Sbjct 1009235 CTGTCCGTGACGAGAGGCAAACTTGTCTCCAAT 1009203
>seq2
Length=1754098
Score = 89.7 bits (98), Expect = 2e-12
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| |||| | ||||| |||||| ||||||||||| || | ||| ||||||||||| |||
Sbjct 1240709 GCTCCGTAAGCAATCACACAATCTCGCTCCATTTCTCCCAGACGCAGACCACCATCTCGA 1240768
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| | ||| |||| ||||| ||||||||| | |||||| || || |||
Sbjct 1240769 GATCGACCTTCGGTGGGCTGTCGAGTGAGAACCGCTCGAGGACCTCGGGGTCGAGCATGC 1240828
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
||| || | |||||||||||||| ||||||| | ||| || | ||| |||
Sbjct 1240829 ATCTTGTCCATGACCATATGCTTGAGCTTCTGGTAGTAGATGGGGCCAAAGAAAATG 1240885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816770262828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |