Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq14 127 4e-24 >seq14 Length=605277 Score = 127 bits (140), Expect = 4e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | || ||||| || || ||||| || || || ||||| || ||| ||| Sbjct 299721 CGGAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCG 299780 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||||||||| || |||| || || || || || ||||| ||||| Sbjct 299781 TCCTCAAGCTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 299840 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| | || ||||| ||||| || || | || || || | ||| || Sbjct 299841 TCCTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCGAGAGTGATG 299900 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || |||| ||||| ||||| |||||||| Sbjct 299901 GTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 299935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826646494916