Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=2434256 Score = 98.7 bits (108), Expect = 2e-15 Identities = 145/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA 110745 ||||||| ||| | |||| ||||| |||| || | ||| ||| | ||||| || || | Sbjct 1213870 TTGTTCCCATGCTCCGAGTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACA 1213811 Query 110746 ---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 | ||| | ||||| |||| | || || |||||| | ||||| || || |||| Sbjct 1213810 AGCGTCCTGGAGCGTTTGCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGATTTCT 1213751 Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862 | | || || ||||| || ||| || ||| | |||||||||||| | ||||| ||| Sbjct 1213750 TGAATCTGCGCAAAAACCACGGAGCCGAGGAAAACAGAGCACGTGATCTCTTTTACGCAT 1213691 Query 110863 TGTGGATTTCAGATTTATTCATGAA 110887 | ||| || | ||| | |||||||| Sbjct 1213690 TATGGGTTCCCGATCTGTTCATGAA 1213666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812130934284