Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 2e-15
>seq1
Length=2434256
Score = 98.7 bits (108), Expect = 2e-15
Identities = 145/205 (71%), Gaps = 3/205 (1%)
Strand=Plus/Minus
Query 110686 TTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA 110745
||||||| ||| | |||| ||||| |||| || | ||| ||| | ||||| || || |
Sbjct 1213870 TTGTTCCCATGCTCCGAGTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACA 1213811
Query 110746 ---GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802
| ||| | ||||| |||| | || || |||||| | ||||| || || ||||
Sbjct 1213810 AGCGTCCTGGAGCGTTTGCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGATTTCT 1213751
Query 110803 TAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAA 110862
| | || || ||||| || ||| || ||| | |||||||||||| | ||||| |||
Sbjct 1213750 TGAATCTGCGCAAAAACCACGGAGCCGAGGAAAACAGAGCACGTGATCTCTTTTACGCAT 1213691
Query 110863 TGTGGATTTCAGATTTATTCATGAA 110887
| ||| || | ||| | ||||||||
Sbjct 1213690 TATGGGTTCCCGATCTGTTCATGAA 1213666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812130934284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |