Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 5e-18
seq14 93.3 1e-13
>seq4
Length=1325655
Score = 107 bits (118), Expect = 5e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||| | || ||||| ||| |||
Sbjct 386589 CAGATCTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 386648
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || |||||| |||||| ||
Sbjct 386649 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 386708
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||||| |||||| | || || || | || | | || |||||| ||
Sbjct 386709 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 386768
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||| ||||| || || ||| || |||| |||
Sbjct 386769 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 386807
>seq14
Length=605277
Score = 93.3 bits (102), Expect = 1e-13
Identities = 120/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 206226 TTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGA 206285
||||||||| |||| || ||| |||||||| || || || || || |||||
Sbjct 298933 TTCTGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGA 298874
Query 206286 CGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTA 206345
| || |||||||||||||||| |||||| |||| || || | || | |||| ||
Sbjct 298873 CCAGCAGCGACTTATCTTCGCCGGTAAGCAGCTGGAGGACGGTCGAACCCTTTCCGACTA 298814
Query 206346 CAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||| ||||||| || || ||||| |||||||| | |||| |||
Sbjct 298813 CAACATCCAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGA 298768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820133748524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |