Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4 107 5e-18 seq14 93.3 1e-13 >seq4 Length=1325655 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 386589 CAGATCTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 386648 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || |||||| |||||| || Sbjct 386649 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 386708 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||||||||||||||| |||||| | || || || | || | | || |||||| || Sbjct 386709 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 386768 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||| ||||| || || ||| || |||| ||| Sbjct 386769 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 386807 >seq14 Length=605277 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 206226 TTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGA 206285 ||||||||| |||| || ||| |||||||| || || || || || ||||| Sbjct 298933 TTCTGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCCCCGGA 298874 Query 206286 CGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTA 206345 | || |||||||||||||||| |||||| |||| || || | || | |||| || Sbjct 298873 CCAGCAGCGACTTATCTTCGCCGGTAAGCAGCTGGAGGACGGTCGAACCCTTTCCGACTA 298814 Query 206346 CAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||| ||||||| || || ||||| |||||||| | |||| ||| Sbjct 298813 CAACATCCAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGA 298768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820133748524