Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq24 188 7e-43 seq3 96.9 3e-15 >seq24 Length=170883 Score = 188 bits (208), Expect = 7e-43 Identities = 974/1533 (64%), Gaps = 47/1533 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| | || |||||||| || ||||| |||| |||| || | ||| ||| | || Sbjct 96838 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTC-GAGAGTAAATGTTGGAGGTGTAGGG 96780 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || |||| || ||| | || || | |||| ||||| |||||| || || Sbjct 96779 CTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAAC 96720 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 || || || ||||||| |||| | ||| ||| |||| | | | ||| ||||| Sbjct 96719 CAGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCA 96660 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131 | | ||||| ||||||||||||| ||| |||| || |||| | ||| ||| Sbjct 96659 AAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGA 96600 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191 ||| ||| || |||| ||||| | |||| || | ||||||| || Sbjct 96599 GCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGC 96540 Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251 ||| | ||| ||||| ||| ||| || |||| || | || || | ||| | Sbjct 96539 TCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAA 96480 Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311 || | |||||| || |||| ||||||| |||||| | ||| | | |||||||| Sbjct 96479 GGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCG 96420 Query 147312 ATGCTTTTCG-TTGCTGCGCTTC---GCGCTC-GCTATGGGATAGTGGTTGCGATCAATA 147366 ||| ||| || || |||| || ||| | | ||| |||| ||| || || ||| Sbjct 96419 ATG----TCGCATGTTGGACTTCTTTGC-CTCGGGAACGGGGTAGTAGTTTCGGTCGATA 96365 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA- 147425 || ||||||||| ||||| | ||||| | || | || |||| ||| || || Sbjct 96364 ATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAG 96305 Query 147426 ----AGTCCCGTCTTCGACACGTACG-CATTGGT--TCACGGCGATAGACGCCAGATTGC 147478 ||| | ||| | || | || ||| || ||| || || ||||| |||| Sbjct 96304 AAGGAGT--TGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGC 96247 Query 147479 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATT 147538 | || ||| ||| |||| ||||| || || ||| |||||||||| | | Sbjct 96246 AAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACT 96187 Query 147539 TTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGT 147598 | ||| ||| | || | ||| ||| || || ||||| || || ||| |||||||| Sbjct 96186 TGATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGA 96127 Query 147599 ACGGTCCGCCGGTCTC-GACTTGCGTTTCAACGATAA------ACCTATGCAGGTCCTGC 147651 | || |||| ||| | || || | ||| || ||| ||| | ||| Sbjct 96126 AGGGGTTACCGGACTCGGTCTGGCAGT----CGAGAATGTGGTACC---ACAGCTTCTGG 96074 Query 147652 GCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAAC 147711 || | | | ||| |||||||| || |||||| ||||||||| | ||| ||| Sbjct 96073 GCGGGGATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAAC 96014 Query 147712 TCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATG 147771 |||||||||||| ||| | || |||||||||| | || ||||| || | |||| | Sbjct 96013 TCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCG 95954 Query 147772 TCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831 ||| | | || || ||| |||||||| || | |||||| || | || || Sbjct 95953 GCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCT 95894 Query 147832 CGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTC 147890 || ||| ||||| || ||| | || | || || | | ||||||| Sbjct 95893 CGGGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGATGTC 95835 Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947 | |||||||||| |||| ||| | ||| | || || ||| || || |||||||| Sbjct 95834 GTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTC 95775 Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007 || | || | ||||||| | || |||| |||||| | | ||| | | || || Sbjct 95774 CACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCC 95715 Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067 ||||||| || | | |||| |||||| | | ||| | | | || || || Sbjct 95714 GTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACC 95655 Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATG 148125 ||| | |||| || || ||| ||| | | | || |||||||||||||||| Sbjct 95654 GCCAGCAGACTTGGAAAT--CAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATG 95597 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| || | | | | |||||||| |||| || || | ||||| || Sbjct 95596 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCG 95537 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 | | |||||||| ||||| ||||| | || ||| ||| | || ||||| Sbjct 95536 TTGTAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGGTCTCG 95477 Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305 || || | |||||||| ||||| || || | | || ||||||| ||| ||||| Sbjct 95476 ATGGCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGG 95417 Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTG-AGAAGATATCCATTTTCGAGGGTTTTGTA 148364 ||||| |||||||| ||||| || | | || ||| | || |||||||| | Sbjct 95416 GGTCGCTCGGCAACAGCTCCGTTGA-CTCGCAACAGGTATGCTCGCTCCAGGGTTTTAAA 95358 Query 148365 ACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397 |||||||| ||||| || ||| | ||||| Sbjct 95357 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTA 95325 >seq3 Length=1361780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 327/498 (66%), Gaps = 21/498 (4%) Strand=Plus/Plus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGAT---CGAGAGCGAGACCGCCACGCTGGCCGAG 46829 || |||||| | ||||| | |||||||| ||| |||| |||| | | |||| Sbjct 14709 AAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGA---CGAGGAGTCCACCTTTGGCGAG 14765 Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889 || | | || || || ||||| || | ||||| || ||| ||| ||| |||| Sbjct 14766 CGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTCCATC 14825 Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949 || | | || | ||| | ||||| ||||| || ||| |||||| | || || Sbjct 14826 TTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCT 14885 Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGA 47008 || ||||| || || ||||| |||||||| ||||| || || || | || | Sbjct 14886 CGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCAC-CTCG------A 14938 Query 47009 GAAATTAAACTCGGACACGATCCT-GAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAA 47065 ||| | ||| | | ||| | ||| | || || ||||| || ||||||| | Sbjct 14939 GAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCA 14998 Query 47066 GGAGTTTTTTACTGCGGCGCTGCCC-GTCGCCTTGCTGGGCATGAACGCACAGTCTATGT 47124 |||||| | || | || |||||| || | || ||| ||||||||||| || |||| Sbjct 14999 GGAGTTCCTGACCGACGCTCTGCCCTGTGGTCT-GCTCGGCATGAACGCCAAGCTCATGT 15057 Query 47125 GCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATAT 47183 || | || ||||||||||| || || || ||| |||| ||||| |||| | || Sbjct 15058 GCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGG-CAACACCAAGGTC 15116 Query 47184 TTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAAT 47243 | || | || || || || || ||| | ||||| || || | || || ||||| Sbjct 15117 TACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCAAC 15176 Query 47244 TTTTTCGAGAAACGAGTC 47261 || |||||||| |||||| Sbjct 15177 TTCTTCGAGAAGCGAGTC 15194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610937863840