Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq24 188 7e-43
seq3 96.9 3e-15
>seq24
Length=170883
Score = 188 bits (208), Expect = 7e-43
Identities = 974/1533 (64%), Gaps = 47/1533 (3%)
Strand=Plus/Minus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951
||||| | || |||||||| || ||||| |||| |||| || | ||| ||| | ||
Sbjct 96838 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTC-GAGAGTAAATGTTGGAGGTGTAGGG 96780
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || ||| | || || | |||| ||||| |||||| || ||
Sbjct 96779 CTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAAC 96720
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
|| || || ||||||| |||| | ||| ||| |||| | | | ||| |||||
Sbjct 96719 CAGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCA 96660
Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131
| | ||||| ||||||||||||| ||| |||| || |||| | ||| |||
Sbjct 96659 AAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGA 96600
Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGC 147191
||| ||| || |||| ||||| | |||| || | ||||||| ||
Sbjct 96599 GCCCTGGAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGC 96540
Query 147192 TCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTA 147251
||| | ||| ||||| ||| ||| || |||| || | || || | ||| |
Sbjct 96539 TCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAA 96480
Query 147252 AGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCG 147311
|| | |||||| || |||| ||||||| |||||| | ||| | | ||||||||
Sbjct 96479 GGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCG 96420
Query 147312 ATGCTTTTCG-TTGCTGCGCTTC---GCGCTC-GCTATGGGATAGTGGTTGCGATCAATA 147366
||| ||| || || |||| || ||| | | ||| |||| ||| || || |||
Sbjct 96419 ATG----TCGCATGTTGGACTTCTTTGC-CTCGGGAACGGGGTAGTAGTTTCGGTCGATA 96365
Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA- 147425
|| ||||||||| ||||| | ||||| | || | || |||| ||| || ||
Sbjct 96364 ATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAG 96305
Query 147426 ----AGTCCCGTCTTCGACACGTACG-CATTGGT--TCACGGCGATAGACGCCAGATTGC 147478
||| | ||| | || | || ||| || ||| || || ||||| ||||
Sbjct 96304 AAGGAGT--TGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGC 96247
Query 147479 AGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATT 147538
| || ||| ||| |||| ||||| || || ||| |||||||||| | |
Sbjct 96246 AAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACT 96187
Query 147539 TTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGT 147598
| ||| ||| | || | ||| ||| || || ||||| || || ||| ||||||||
Sbjct 96186 TGATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGA 96127
Query 147599 ACGGTCCGCCGGTCTC-GACTTGCGTTTCAACGATAA------ACCTATGCAGGTCCTGC 147651
| || |||| ||| | || || | ||| || ||| ||| | |||
Sbjct 96126 AGGGGTTACCGGACTCGGTCTGGCAGT----CGAGAATGTGGTACC---ACAGCTTCTGG 96074
Query 147652 GCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAAC 147711
|| | | | ||| |||||||| || |||||| ||||||||| | ||| |||
Sbjct 96073 GCGGGGATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAAC 96014
Query 147712 TCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATG 147771
|||||||||||| ||| | || |||||||||| | || ||||| || | |||| |
Sbjct 96013 TCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCG 95954
Query 147772 TCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831
||| | | || || ||| |||||||| || | |||||| || | || ||
Sbjct 95953 GCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCT 95894
Query 147832 CGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTC 147890
|| ||| ||||| || ||| | || | || || | | |||||||
Sbjct 95893 CGGGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGATGTC 95835
Query 147891 GGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTC 147947
| |||||||||| |||| ||| | ||| | || || ||| || || ||||||||
Sbjct 95834 GTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTC 95775
Query 147948 GACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCC 148007
|| | || | ||||||| | || |||| |||||| | | ||| | | || ||
Sbjct 95774 CACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCC 95715
Query 148008 GTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC 148067
||||||| || | | |||| |||||| | | ||| | | | || || ||
Sbjct 95714 GTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACC 95655
Query 148068 GCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATG 148125
||| | |||| || || ||| ||| | | | || ||||||||||||||||
Sbjct 95654 GCCAGCAGACTTGGAAAT--CAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATG 95597
Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185
||||| || | | | | |||||||| |||| || || | ||||| ||
Sbjct 95596 GAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCG 95537
Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245
| | |||||||| ||||| ||||| | || ||| ||| | || |||||
Sbjct 95536 TTGTAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTAGGTCTCG 95477
Query 148246 ATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGT 148305
|| || | |||||||| ||||| || || | | || ||||||| ||| |||||
Sbjct 95476 ATGGCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGG 95417
Query 148306 GGTCGTTCGGCAACTTGATTGTTGATCTTG-AGAAGATATCCATTTTCGAGGGTTTTGTA 148364
||||| |||||||| ||||| || | | || ||| | || |||||||| |
Sbjct 95416 GGTCGCTCGGCAACAGCTCCGTTGA-CTCGCAACAGGTATGCTCGCTCCAGGGTTTTAAA 95358
Query 148365 ACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397
|||||||| ||||| || ||| | |||||
Sbjct 95357 GCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTA 95325
>seq3
Length=1361780
Score = 96.9 bits (106), Expect = 3e-15
Identities = 327/498 (66%), Gaps = 21/498 (4%)
Strand=Plus/Plus
Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGAT---CGAGAGCGAGACCGCCACGCTGGCCGAG 46829
|| |||||| | ||||| | |||||||| ||| |||| |||| | | ||||
Sbjct 14709 AAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGA---CGAGGAGTCCACCTTTGGCGAG 14765
Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889
|| | | || || || ||||| || | ||||| || ||| ||| ||| ||||
Sbjct 14766 CGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCTCTTTCGCCTCCATC 14825
Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949
|| | | || | ||| | ||||| ||||| || ||| |||||| | || ||
Sbjct 14826 TTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATTTCT 14885
Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGA 47008
|| ||||| || || ||||| |||||||| ||||| || || || | || |
Sbjct 14886 CGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCTCAC-CTCG------A 14938
Query 47009 GAAATTAAACTCGGACACGATCCT-GAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAA 47065
||| | ||| | | ||| | ||| | || || ||||| || ||||||| |
Sbjct 14939 GAACCGACCCTCCAAGAAGATTGTCGAGGACGTCATTGTCGAGGCTGTTGGCATCGAGCA 14998
Query 47066 GGAGTTTTTTACTGCGGCGCTGCCC-GTCGCCTTGCTGGGCATGAACGCACAGTCTATGT 47124
|||||| | || | || |||||| || | || ||| ||||||||||| || ||||
Sbjct 14999 GGAGTTCCTGACCGACGCTCTGCCCTGTGGTCT-GCTCGGCATGAACGCCAAGCTCATGT 15057
Query 47125 GCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATAT 47183
|| | || ||||||||||| || || || ||| |||| ||||| |||| | ||
Sbjct 15058 GCCAGTACATTGAGTTTGTCGCCGACCGACTGCTGGTTGCTCTCGG-CAACACCAAGGTC 15116
Query 47184 TTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAAT 47243
| || | || || || || || ||| | ||||| || || | || || |||||
Sbjct 15117 TACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGCCGGTAAGACCAAC 15176
Query 47244 TTTTTCGAGAAACGAGTC 47261
|| |||||||| ||||||
Sbjct 15177 TTCTTCGAGAAGCGAGTC 15194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610937863840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |