Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 201 1e-46 >seq10 Length=1040050 Score = 201 bits (222), Expect = 1e-46 Identities = 483/725 (67%), Gaps = 32/725 (4%) Strand=Plus/Plus Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCA-- 146860 || || | ||| |||||||| |||| || || | |||| ||||| ||||||| | Sbjct 846277 TGGGGCTTGTATCCCTCGAGCACAAAGTCCTCATACTTGAAGTCGTCAATGTCCTTGATG 846336 Query 146861 -CCCGCCTCAAAATCTTGAGCTTGGGGAAGG-GTCGGGGGTTCCTGGCCAGCTGAATTTT 146918 |||| |||| | ||||||||||||| | | || |||| | | | ||| || Sbjct 846337 TCCCGTG-CAAA--CGTGAGCTTGGGGAACTCGCCTGGCGTTCGCG-CAATCTGCTGCTT 846392 Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978 ||| | |||||||| | ||| ||||||||||| |||| |||||| || | || || Sbjct 846393 CAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTCGCC 846452 Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 | || | ||||| || || | ||| || | ||| | ||| ||| ||||| Sbjct 846453 GCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAATGTT 846512 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAG------ 147092 |||||| |||||||| |||| ||| | |||| |||||||||||||||||| || Sbjct 846513 GAAGGGCACCCCCAGTCCCAGGTCACAGGACCGCTGGTACAGCTGGCACGACAGTTGGCC 846572 Query 147093 ------------CTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 || | || | |||||| ||||| || | |||||||| || ||||| Sbjct 846573 GCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAGGCAG 846632 Query 147141 CGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||||| || || ||||| |||||||| ||||| | | | || | | || || Sbjct 846633 AGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCTGAGG 846692 Query 147201 GTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTT 147260 ||| | || | | || ||| ||||||| ||||||||||||||| ||||| Sbjct 846693 GTTGGTTTTGAGAGTGTGAATCACCTGTTTCAGCTGATCCACGCCCTGGCCCGTGTAGTC 846752 Query 147261 TGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCC 147320 ||| |||||||| |||| || || || || | ||| || |||||||| || || || Sbjct 846753 TGTGTCGCAGTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAGACGGGTCC 846812 Query 147321 CAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGT 147379 ||| ||||| || ||| | || ||| || || |||||||| ||| || | Sbjct 846813 CAGATCGCCTTCTCGTCGGTG-GCCCAGTCCGGCCTTTTCCAGAAACTCCTTGGATCCAT 846871 Query 147380 GGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGG- 147438 | ||||||||||| | || || || | ||| ||| ||| | ||||| Sbjct 846872 TGCCGTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTCTTGCCGTCAGTGCA--CCCGGC 846929 Query 147439 -ATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAG 147497 | ||||| | ||||||||||| || |||| ||||||||| || ||||||| ||| Sbjct 846930 CACAAACCACAAAAGCTCCTCCAACACGCCCCGGTAAAAGACCCGTTTTGTGGTCAACAG 846989 Query 147498 GGGGA 147502 ||||| Sbjct 846990 GGGGA 846994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487679081600