Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq24 122 9e-23 seq3 122 9e-23 seq4 120 3e-22 seq14 116 4e-21 >seq1 Length=2434256 Score = 134 bits (148), Expect = 1e-26 Identities = 548/858 (64%), Gaps = 7/858 (1%) Strand=Plus/Minus Query 7554 GGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGA 7613 ||||||| ||||| ||||| || | ||||| |||| || |||||| | ||| | Sbjct 1214193 GGAACGACCCCAACATATGCTCATGAGAGTGGCTCTGGGTATCCACGGCAACGACCTCCC 1214134 Query 7614 CGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCAC 7673 | | | || || ||||| |||| | ||| |||| || |||||||| || || Sbjct 1214133 TAAGGTCCTCGATACTTACCAGGCTCTGTCGCTCAAAAAGTTCACACACGCTTCTCCAAC 1214074 Query 7674 CATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCG 7733 | |||| || ||||| | | || | || || || ||| || | ||||| | Sbjct 1214073 CCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTCCTGCTTTCTGGTCGCCATGAG 1214014 Query 7734 CGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATA 7793 ||||||| |||||||||||| ||| |||| || |||||| | ||||| ||| | Sbjct 1214013 CGAAGACTCCATCGACGGCATCTACGACACTCTCAAAACGTGCGCCCAAATTTC-AAAGA 1213955 Query 7794 CGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGT 7852 | || || || ||||||||| | | || || | | || || || | | |||| Sbjct 1213954 CCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGCTAAGGGCACCATCATCACAG 1213895 Query 7853 CCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGC 7912 | | | |||||| || || | | |||||| | || |||||||||||| | | Sbjct 1213894 GCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCGAGTGTTCAATAACACAGCCA 1213835 Query 7913 GACATGTAGACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGT 7969 || | || ||||| || || || ||| || || ||| |||| |||||||| | Sbjct 1213834 GATACGTGGACCAAGGCGGCAACAAGCGTCCTGGAGCGTTTGCAGTCTACTTGGAGCCAT 1213775 Query 7970 GGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCA 8029 |||| ||||| |||| | | | |||||||| ||| || ||| || | || Sbjct 1213774 GGCATGCGGATATTTTGGATTTCTTGAATCTGCGCAAAAACCACGGAGCCGAGGAAAACA 1213715 Query 8030 AAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATT 8089 ||| || ||||| || | || ||| ||||| ||||||||||| |||| | | || | Sbjct 1213714 GAGCACGTGATCTCTTTTACGCATTATGGGTTCCCGATCTGTTCATGAAGAGAGTCGAAA 1213655 Query 8090 TCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACG 8149 | || |||||||||| | || ||| | || | | | || | | | Sbjct 1213654 GAGGCGAGAAATGGTCGCTTTTCTGTCCCAAAAAGGCTCCCGGACTGGCAGACATCTGGG 1213595 Query 8150 GTTCAAAATTTGAACAATTGTACAAACAATACGA-ACACGACGGCGCGTACGTGCGGCAA 8208 | | | || || | |||| || | ||||| | ||| || |||| |||| Sbjct 1213594 GACCTGATTTCGACCGCAAGTACGAAGAGTACGAGTCTCGAAAGC-TGTACAACTCGCAA 1213536 Query 8209 GTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCG 8268 | | || | || ||| | || ||| | | | || | ||||| || ||| Sbjct 1213535 ATCGACGCCCAGGAGCTGTTCAAGGCGATTCTGACAAGCCAGATTGAAACTGGAGGCCCG 1213476 Query 8269 TACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATT 8328 | ||||||||| |||||| |||||||| ||| ||| || | || | |||||||| Sbjct 1213475 TTCATGCTGTATAAAGACAGCTGCAACGCGAAATCCAACCAGAAGAATCTCGGCACCATC 1213416 Query 8329 TGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTT 8388 | |||||||||| |||| ||||| |||||| | ||||| || ||||| ||| Sbjct 1213415 AAATCGTCCAATCTGTGCACTGAGATTGTCCAGTACTCGTCTCCCGAAGAGGTGGCTGTT 1213356 Query 8389 TGCAATCTAGCGTCGGTG 8406 ||||| || || || ||| Sbjct 1213355 TGCAACCTGGCTTCCGTG 1213338 >seq24 Length=170883 Score = 122 bits (134), Expect = 9e-23 Identities = 390/599 (65%), Gaps = 7/599 (1%) Strand=Plus/Plus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 ||| ||||| | ||||||| | || || ||| || || ||| | |||| ||| Sbjct 95379 TACCTGTTGCGAGTCAACGGAGCTGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTG 95438 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 | || || || ||||| || ||||||| | ||| | || || ||| | |||||| Sbjct 95439 TCCGTCGGAATCCACGGTGACGACATTGCCCGAGCCATCGAGACCTACAACTACATGTCT 95498 Query 7645 TTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAA 7704 ||| | ||||| |||||||| |||||| | | ||| || || | ||| || Sbjct 95499 CAGAAGTACTTTACCCACGCTTCCCCCACCCTCTACAACGCTGGAACCCCCCAGCCCCAG 95558 Query 7705 TTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACG 7764 |||| |||||||| | | | |||| || ||| |||||||||||| ||| | || Sbjct 95559 ATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCCATCGACGGCATCTACGATACC 95618 Query 7765 CTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823 || | || || || |||||||| | | ||||| || ||||| | | || | Sbjct 95619 CT-CAAGACCTGTGCTCTGATTTCCAAGTCTGCTGGCGGTATCGGTCTCTCCATCCACAA 95677 Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883 | | || |||| ||| | ||| | ||||||||||| ||| |||| | | ||| Sbjct 95678 CATCCGAGCCACCGGCTCCTACATTGCCGGCACCAACGGAACCTCCAACGGTATCGTGCC 95737 Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAA 7940 |||| |||| || | ||| ||| | | ||| | || |||||||| || ||||| Sbjct 95738 CATGCTGCGTGTCTACAACAACACTGCCCGATACGTGGACCAGGGAGGCAACAAGCGACC 95797 Query 7941 AGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCT-AAATC 7999 || ||| |||||| || | ||||| ||||||| ||||| | || ||| || | | Sbjct 95798 CGGAGCCTTTGCCATGTACCTTGAGCCCTGGCACGACGACATCTTCG-AGTTCTGCGAGC 95856 Query 8000 TGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGG 8059 |||| ||| || || || | ||| || || || ||| | | ||||| Sbjct 95857 TGCGAAAGAACCACGGAAAGGAGGAGATTCGAGCCCGAGACCTGTTCCTGGCCCTGTGGA 95916 Query 8060 TGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCC 8118 | ||||||||||| ||| ||| || | |||| | ||| | |||||||||||| Sbjct 95917 TCCCCGATCTGTTCATGGAGCGAGTCGAGCAGAACGCCGAGTGGACTCTCATGTGCCCC 95975 >seq3 Length=1361780 Score = 122 bits (134), Expect = 9e-23 Identities = 168/234 (72%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| |||||||| || || || || ||||| ||||| || ||||||||||| | Sbjct 557871 CCTCCTCGGAGTCGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 557812 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || ||||||| |||||||| || || || Sbjct 557811 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGG 557752 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | ||||| || || ||||| Sbjct 557751 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGACTCCACC 557692 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA-TTTTGTT 134719 ||||| || || || || || || | || || || || ||||||| | ||||| Sbjct 557691 TCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTATTGTT 557638 >seq4 Length=1325655 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||||||| ||||| || || ||||| ||||| || ||||||||||| | Sbjct 386812 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 386753 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | |||||||| || || || Sbjct 386752 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 386693 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 386692 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 386633 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || || || || || |||||||| | || || || || || ||||||| Sbjct 386632 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCATTT 386584 >seq14 Length=605277 Score = 116 bits (128), Expect = 4e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 134490 CCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACG 134549 |||| |||||| | || || || || ||||| ||||| || ||||||||||| | | Sbjct 299712 CCTCGGAGTCGGAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGG 299771 Query 134550 GTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATG 134609 || | ||| || ||||| || || |||||||||| |||||||| || || || || Sbjct 299772 GTTCGGCCGTCCTCAAGCTGCTTTCCAGCAAAAATCAGTCGCTGCTGGTCCGGGGGAATT 299831 Query 134610 CCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCG 134669 || || || || ||||| || ||||| ||| | |||||||| || || || ||| Sbjct 299832 CCCTCCTTGTCCTGAATCTTAGACTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCG 299891 Query 134670 AGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| ||||| || || || | || || || || || ||||| Sbjct 299892 AGAGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 299935 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||||| | ||| ||||| || ||||||||||| || |||||||||||| | Sbjct 298763 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAA 298822 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| || ||||| || || || || || | |||||||| || || || Sbjct 298823 AGGGTTCGACCGTCCTCCAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 298882 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| || || || || Sbjct 298883 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 298942 Query 134667 TCGAGAGTAATGGT 134680 || || |||||||| Sbjct 298943 TCAAGGGTAATGGT 298956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398122030880