Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 113 1e-19 >seq3 Length=1361780 Score = 113 bits (124), Expect = 1e-19 Identities = 350/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Plus Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408 |||||||| |||||| ||||||| ||| ||| ||| | | ||||| | | | || Sbjct 14406 GAGGAGATCGATCTCGGCAAGGACATGGGCGACTGGGAGAACCGACTCAACAACGACGA- 14464 Query 443409 CGCGATTTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGT 443465 |||||| ||||| | | | ||||||||||||| | |||||| |||||| Sbjct 14465 -GCGATT-CTTCATCTCTCACGTTCTGGCCTTCTTTGCTGCCTCCGACGGAATCGTCAAC 14522 Query 443466 GAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTAC 443525 ||||| |||||| ||| |||| || ||| | |||||||| | ||||||| Sbjct 14523 GAGAACCTGGTGGAGCGATTCTCCGGCGAGGTCCAGGCTCCCGAGGCCAAGTGCTTCTAC 14582 Query 443526 GCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGACA 443585 | ||||| | ||||||||||| ||| | || |||| | | | ||| | ||| Sbjct 14583 GGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACCTACTCGCTGCTCATCGACACA 14642 Query 443586 CTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCATCGT--TCATGACCACGCCA 443642 || || || || | | |||| | | || ||| || || ||||| || Sbjct 14643 -TACATC--AAGGACCCCAAGGAGCGAAACTACCTGTTCAACGCCATCGAGACCATCCCC 14699 Query 443643 GGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCT--CGAACGAGAAAATCTCAGCT 443700 |||||| | ||| | |||||| ||||| | | ||||| | || || || Sbjct 14700 TGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATTTCCGACGAGGAG-TC-CACCT 14757 Query 443701 TCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTA 443760 | | |||||| || | || ||||| | ||||| || | || || ||| |||| Sbjct 14758 TTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCTTTTTCTCAGGCT-CTTTC 14816 Query 443761 GCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAA 443820 ||||||||||||||| | || ||||| || || |||| ||| || ||||| ||||| Sbjct 14817 GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAG 14876 Query 443821 CTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || || ||| ||||||||| |||| |||||| |||||||| |||| Sbjct 14877 CTCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCT 14925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335104575580