Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq24 279 6e-70
seq3 129 7e-25
>seq24
Length=170883
Score = 279 bits (308), Expect = 6e-70
Identities = 1155/1792 (64%), Gaps = 69/1792 (4%)
Strand=Plus/Minus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
||||||| || || ||| ||| | | ||| || |||||||| || |||||||| |
Sbjct 97176 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTCTTGAGAC 97117
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450
| | ||||| |||| | ||||| || | ||||||| ||| || || ||| |||
Sbjct 97116 CCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGG---TCCTTGA 97060
Query 110451 AGAG---GTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATC 110505
| | ||| | ||| |||| ||||||||||| || || | || ||||| ||
Sbjct 97059 TGTGAATGTTGAGGGACTGGGACT--GGTCAATGAAGGGCGATCGGTCGGCAGCCATCTC 97002
Query 110506 AATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTGG 110565
|||| |||| | ||| ||||| || || || || || | |||||| || | ||
Sbjct 97001 GATGATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCCTGGGG 96942
Query 110566 GATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCTT 110625
||| | | ||| ||||| | ||| || | ||| || | | |||||| ||
Sbjct 96941 GATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATTCGGTTCTTCATGGTCTC 96882
Query 110626 GGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTC 110685
||| ||||||| || ||||| |||| || ||||||||| |||||
Sbjct 96881 ATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTC 96822
Query 110686 ACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATT 110745
|| || || || || ||| ||||| | ||||| || || ||||| || ||
Sbjct 96821 GCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAA 96762
Query 110746 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 110805
|| | || || | ||||||||| || ||||| || || | || || ||| || |
Sbjct 96761 GCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGAGTTTCGCAT 96702
Query 110806 ACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT----TGGTTT 110861
||| ||| | |||| |||| ||| | ||||| || | |||| || |
Sbjct 96701 ACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCA---AAGCTCGGAGGGAGT 96645
Query 110862 CACCTTCCCACATGTCAAACTGAAG--CACCCCTTGGGACGCGGGAGAACCCTCAAAGGT 110919
||| || ||||| |||||||||||| | ||||| ||| || ||||| |||| |||||
Sbjct 96644 CACGTT-CCACAGGTCAAACTGAAGGTCTCCCCT--GGAGGCAGGAGAGCCCTGGAAGGT 96588
Query 110920 TTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACAT 110979
|| |||| ||| | | ||||| || | ||||| | || | |||| || ||
Sbjct 96587 CTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTGGTAGAT 96528
Query 110980 GGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA 111039
||| || ||||| | || | || |||||| || | || ||||| | | || |||
Sbjct 96527 GGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAA-GGGAAGTCGCA 96469
Query 111040 CA-AAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098
| || || || || ||||| |||||||||| | ||||||||| |||||||| |
Sbjct 96468 GAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTCGCATGT 96409
Query 111099 TAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155
| ||||| | | ||| |||||| || | |||| ||| || | ||| || |
Sbjct 96408 TGGACTT---CTTTGCCTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGTTGAGGT 96352
Query 111156 TTTTGGTAACAAT--CTTT-GTGATTTCATGAAGTTTTTCATAATC-----AAAAGTGCG 111207
|| ||||| |||| | ||| || || || || | | || | ||| |
Sbjct 96351 TT---CGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGG 96295
Query 111208 AGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCT 111266
||| ||| | ||||| | | || ||||| || || |||| |||||||||||| ||
Sbjct 96294 TGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCACCT 96235
Query 111267 CATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCA 111326
|||| | | |||||| | ||| || || | ||||||| ||| || || || |
Sbjct 96234 CATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTCCGA 96175
Query 111327 AATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCG 111386
||||| ||||| ||| |||||| |||||||||||||||||| |||| | || |
Sbjct 96174 GGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCGG 96115
Query 111387 TCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGT 111443
||| ||||| | | |||||| | ||| | | || | ||| || |||| |||
Sbjct 96114 ACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGG---GATGGTTCGT 96059
Query 111444 TGGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCCTCACCCACCGC 111501
| || || |||||| |||||||| ||| || |||| ||||| || || |
Sbjct 96058 CGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGAC 96000
Query 111502 GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCA 111559
|||| ||||| || || || || || | |||| ||| | | | ||| |||
Sbjct 95999 GTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACT--CGGCGTTCTGCTCG 95942
Query 111560 ACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCC 111619
|| |||| |||||| || || || |||||||||| || || |||| ||| |
Sbjct 95941 ACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATC 95882
Query 111620 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 111679
|| || | || ||||| ||| | ||| |||||| | ||| || ||||||| |||
Sbjct 95881 TCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGC 95822
Query 111680 TCAAGATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCG 111732
||||| || | || | | ||| ||| | | | ||| || | || || ||
Sbjct 95821 TCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCC----TGGTCCACGTATCG 95766
Query 111733 CGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC 111792
|| ||| ||| | || || ||||| || | ||||| | || || || || ||
Sbjct 95765 GGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCC 95706
Query 111793 CCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCA 111852
||| || |||||| | | |||||| | || ||||| ||||| |
Sbjct 95705 GGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGA 95646
Query 111853 CTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTT 111912
||| || || | ||||| | | || || | ||||| |||| ||| ||||| |||||
Sbjct 95645 CTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTT 95586
Query 111913 GTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGT 111972
|| || |||||| || |||||||| || || || ||||| ||| |||||||
Sbjct 95585 CATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGT 95526
Query 111973 TGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031
|| | ||||| | || ||| | || ||||| | || ||| ||||| | | |
Sbjct 95525 GGGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGG 95467
Query 112032 CAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||||||| || |||||||| |||| | || ||||||| ||| | ||| ||
Sbjct 95466 CAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGG 95415
>seq3
Length=1361780
Score = 129 bits (142), Expect = 7e-25
Identities = 351/531 (66%), Gaps = 20/531 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
||||| ||| |||||||| |||||||||||||| || | || ||||| |||||
Sbjct 15202 TAGTCGGAGACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCCATG 15143
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGG-GTGGC--ACCCCAACTTGTTTGAGG 122484
||||| || || || | | ||| | | ||| || || | |||| ||
Sbjct 15142 AAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACC------AGC 15089
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|| || || | ||| |||||||||||| | |||| || | |||||| |||| ||
Sbjct 15088 AGTCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGA 15029
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
||| || || ||||| | |||| | | ||| || |||| ||||| | || |
Sbjct 15028 CCACAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACG 14969
Query 122605 GCGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAA 122663
| | || | | | | | ||||| || | | | || ||||||| ||||||
Sbjct 14968 TCCTCGACAATCTTCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAA 14910
Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723
|| ||| |||||||| ||||| ||||| || || || |||||| || || |||||
Sbjct 14909 GTCGGTGTGCAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 14850
Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTC 122783
|||||| |||||||| | ||| | || | | ||| || || ||||| |||||||||||
Sbjct 14849 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTC 14790
Query 122784 CACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---AAACCA 122840
|| ||||| |||| || || ||| | |||| | |||| | || || |||
Sbjct 14789 GACGGCGGCAAAGGCAATGAGCCGCTCGCCAAAGGTG---GACTCCTCGTCGGAAATCCA 14733
Query 122841 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891
|| | ||||| | |||||||||| || || || | || | ||||||
Sbjct 14732 CTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031654582400
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