Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq24 244 1e-59 seq3 152 6e-32 seq1 89.7 6e-13 >seq24 Length=170883 Score = 244 bits (270), Expect = 1e-59 Identities = 1146/1793 (64%), Gaps = 55/1793 (3%) Strand=Plus/Minus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||| | ||||||| ||||| || ||| | | ||| ||||||||||| || ||| Sbjct 97183 TCAATGGTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCAGTC 97124 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 ||||| |||| ||||||| | || | ||||| |||| | |||| | ||| || Sbjct 97123 TTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGG--- 97067 Query 117918 TCCATGAAGAG---GTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCC 117974 ||| ||| | | ||| | ||||| || || |||||| | || || || ||| Sbjct 97066 TCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATGAAGGGCGATCGGTCGGCAGCC 97007 Query 117975 ATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCA 118034 || || || | |||| | || |||||||| || | ||| |||| ||| || || Sbjct 97006 ATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTTCGGTACAGGTCCTTGATCTCC 96947 Query 118035 TCTGGGATATCCACGATATTTTGGATGGATCCAC---CCGCCTTGACCATGAGATCCTTC 118091 | ||||| | ||| || || | |||||| | ||| || || | | |||| Sbjct 96946 TGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTC 96890 Query 118092 ATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACA 118151 || || ||| ||||||| || || |||| | || ||||||| Sbjct 96889 ATGGTCTCATTCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATC 96830 Query 118152 ACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCA 118210 ||||| || || || |||| ||| || || |||| ||||| ||||| ||||| Sbjct 96829 TGGAACTCGCCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCA 96771 Query 118211 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 118270 ||| ||| || | || || | |||||||| ||||||||||| || | || || Sbjct 96770 CTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGGTGGGCATGGGAGCAACCAGCAGCGA 96711 Query 118271 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTT 118330 ||| || | ||| | | | | || |||| ||| ||||||| || | |||| Sbjct 96710 GTTTCGCATACCGGTCTTCATGATATTGGCCTTAAGATCGTCCCACTCCCAA---AGCTC 96654 Query 118331 TGTCTC---CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTC 118387 | | | | ||||| |||||||| ||| || ||| || || || |||| Sbjct 96653 GGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCTCCCCTGGAGGCAGGAGAGCCCTG 96594 Query 118388 AAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTG 118447 || ||||| || | || || | |||| ||| | ||||||| |||| |||| Sbjct 96593 GAAGGTCTCGTAGGCACCGTCCTCAAGAGCCATCTCGTAAGAGGCCTCGACGGCTCCGTG 96534 Query 118448 ATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAG 118507 || || || || || || | || | |||||||||| | || ||||| | || Sbjct 96533 GTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGCAGACTCAAAGGGAAG 96474 Query 118508 TCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTC 118566 ||| || | || || || || ||||| || ||||| || |||| || ||||||| Sbjct 96473 TCG-CAGAGCCATGAAGGTGTCGGCCAGACCCTGAACACCCAGAGCAATAGGTCGATGTC 96415 Query 118567 TCATATTAGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTAT 118623 ||| || |||||| || ||| ||||| || | || | ||||||| | Sbjct 96414 GCATGTTGGACTTCTTTGC---CTCGGGAACGGGGTAGTAGTTTCGGTCGATAATGGCGT 96358 Query 118624 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-----ACT 118678 | || ||| | || || | ||| || || ||||| | | | || | | | Sbjct 96357 TGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGT 96298 Query 118679 GCGAGTC-TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGG 118737 | ||| ||| | ||||| | | || ||||| || || ||||| || || |||| Sbjct 96297 TGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGGAGGCCAGGTTGCAAACAGCCA 96238 Query 118738 TCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGC 118797 |||||| | || |||||| | ||| || ||||| ||| ||| ||| ||||| | Sbjct 96237 CCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACAGGTTGGAAGACTTGATGGTTC 96178 Query 118798 CCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCC 118857 | | |||||| || || |||||| ||| || ||||||||||| |||||| | || | | Sbjct 96177 CGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTAC 96118 Query 118858 CCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCG 118916 | | ||| || ||| | | |||||| | ||| | | || | || || | || || Sbjct 96117 CGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCTTCTG-GGCGGGGATGGT-TCG 96060 Query 118917 TTG-GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG-GGCTTCAAACTCTTCACCCACGG 118974 | | |||| ||||| | |||||||| ||| || |||| ||||| || || | Sbjct 96059 TCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTT-GAACTCGTCGCCGTAGA 96001 Query 118975 CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAA 119034 | || || || || || | ||||| | ||||| ||| | | || ||| | Sbjct 96000 CGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGA 95941 Query 119035 CCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTT 119094 | |||| |||||| || || |||||||| || ||| ||| || || || ||| | Sbjct 95940 CTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAACAGGTCTCGGGCTCGAATCT 95881 Query 119095 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 119154 | || | || || || |||| ||| | || || | ||| || ||||||| || | Sbjct 95880 CCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGATGTCGTCGTGCCAGGGCT 95821 Query 119155 CCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCG 119208 | ||||||| || | | || ||| | | || |||||| || || | | Sbjct 95820 CAAGGTACATGGCAAAGGCTCCGGGTCGCTT--GTTG-CCTCCCTGGTCCACGTATCGGG 95764 Query 119209 CAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCC 119268 ||||| ||| | ||||| ||||| || | |||||| | ||| || || || || Sbjct 95763 CAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTGCCGG 95704 Query 119269 GAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCA 119326 || || ||| | |||||| || | ||||||| | ||| ||||| || || | Sbjct 95703 CAATGTAGGAGCC--GGTGGCTCGGATGTTGTGGATGGAGAGACCGATACCGCCAGCAGA 95646 Query 119327 CTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT 119386 ||| || || | || || | |||| | ||||||| || ||||| ||||| |||| Sbjct 95645 CTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGATGGAGTCGTCCTT 95586 Query 119387 ATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGT 119446 | || ||||| || |||||| || ||| ||| || ||||||||| |||| || Sbjct 95585 CATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCCAGCGTTGTAGAGGGT 95526 Query 119447 TGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGG 119505 || | |||||| | || ||| | || ||||| | || ||||||||| | | | || Sbjct 95525 GGGGGAAGCGTGGGT-AAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATGGCTCGGG 95467 Query 119506 GAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 119558 |||||| || ||||| || |||| || || ||||| | ||| | |||||| Sbjct 95466 CAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCATCTGCTGGGGT 95414 >seq3 Length=1361780 Score = 152 bits (168), Expect = 6e-32 Identities = 352/522 (67%), Gaps = 20/522 (4%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||||||||||||||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 15193 ACTCGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGAGAGATGTTCTCCATGAAGTCGAAG 15134 Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTG--GC--ACTCCAATCTGTTTGAGGAGACGATCC 129850 ||||| | ||||| | | ||| || || | ||| | || || || || Sbjct 15133 GGGTTGGTGGAGTTGTAGACCTTGGTGTTGCCGAGAGCAACC------AGCAGTCGGTCG 15080 Query 129851 GAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGG 129910 | ||| |||||||||||| |||| || || |||||| |||| || ||| || Sbjct 15079 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCGAGCAGACCACAGGGC 15020 Query 129911 AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATG 129970 || ||||| | |||| ||| ||| ||| | ||||| || | || | | | | Sbjct 15019 AGAGCGTCGGTCAGGAACTCCTGCTCGATGCCAACAGCCTCGACAATGACGTCCTCGACA 14960 Query 129971 GTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCTGGTG 130029 ||| | || |||| || | | | || |||||| |||||| || ||| Sbjct 14959 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTG 14901 Query 130030 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCG 130089 ||||||||||| || || ||||| || || |||||| || || ||||||||||| || Sbjct 14900 CAGACCCTCGTCTCGAGAAATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 14841 Query 130090 CTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGC 130149 |||||| | |||||| || | || ||||| ||||| ||||| ||||| || || Sbjct 14840 CTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCTGAGAAAAAGATACCCTCGACGGCGGC 14781 Query 130150 GAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCAAA-CCACTTCATCGC 130206 || |||| ||| ||||| |||||| ||||| | || ||| |||||| | || Sbjct 14780 AAAGGCAATGAGCCGCTCGCCAAAGG---TGGACTCCTCGTCGGAAATCCACTTGAGAGC 14724 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 ||| | ||||| |||| ||| || |||| ||||| ||| || Sbjct 14723 CCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 14682 >seq1 Length=2434256 Score = 89.7 bits (98), Expect = 6e-13 Identities = 280/428 (65%), Gaps = 8/428 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || || |||||||| || || |||||||| |||||| | | | |||||| | | Sbjct 1212439 CGTAGATAGTACATGCCTGTTTTGAGCCCGGCCTTCCATCCGTGGAAATGCATCGCTGTG 1212498 Query 117897 AACTTGGAGAGGGTTGGACTTTC---CATGAAGAGGTTCATACTTTGGGATTGATCGATG 117953 | ||| | |||| || | || |||||| | ||| | | || || || || ||| Sbjct 1212499 ATTTTGCCGTGGGT--GA-TATCGGGCATGAAAATGTTGAGAGACTGCGACTGGTCAATG 1212555 Query 117954 AAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTC 118013 || | | ||| ||||||||||||| || | | |||||| ||||| | ||| Sbjct 1212556 TAGGGAGCTCGAGCCGCCGCCATATCGATAATGTTGCGAGCCTTGATCTCCCAAGCGGTC 1212615 Query 118014 CTGTAGA-GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGC 118072 || |||| || || | || | || ||||| | |||| | || || || ||| | Sbjct 1212616 CTATAGACGGCTC-TGATGTGTTCGGGGATCTGGGTGATACTCTGTATCGAGCCATTGTC 1212674 Query 118073 CTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 118132 | || || | | ||||| |||| | ||| | || | ||| ||||||| | || Sbjct 1212675 GTGGATGATTCGGTTTTTCATCTCCTCGGTCCACATGCCCAGCTTGATGAGATCTTTCAT 1212734 Query 118133 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 || | |||| || | |||||| || || || || | ||| || || |||| Sbjct 1212735 CAGCCAATGGTTGATCACCAGAAACTCGCCTGCCTGGACTCGACGCAGGTAAATGTTGGA 1212794 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 |||||| |||||||| ||||| |||| |||| || || | ||||| ||||| ||||| Sbjct 1212795 CGTGTACGGCTCAAAACACTCGTTGTGGCCCAGAATCTGAGAAGTGGACGCTGTAGGCAT 1212854 Query 118253 GGGTGCCA 118260 || |||| Sbjct 1212855 AGGAGCCA 1212862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434859860640