Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq24 232 8e-56
seq3 140 4e-28
seq1 113 5e-20
>seq24
Length=170883
Score = 232 bits (256), Expect = 8e-56
Identities = 1143/1788 (64%), Gaps = 61/1788 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| ||||||| ||| || |||| || || || || ||||||| | |
Sbjct 95415 CCCCAGCAGATGATCATGCGAGTGTCCGTCGGAATCCACGGTGACGACATTGCCCGAGCC 95474
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || | ||||| || | ||| || | ||||| | || |||||||
Sbjct 95475 ATCGAGACCTACAACTACATGTCTCAGAAGTACTTT-ACCCACGCTTCCCCCACCCTCTA 95533
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| ||||| || || ||||| ||||| || |||||| || || ||||| ||
Sbjct 95534 CAACGCTGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGA 95593
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| |||| ||||| | || || | | ||||| | || || |||| |||||
Sbjct 95594 CTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTGATTTCCAAGTCTGCTGG 95653
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || | |||||| | | |||||| || ||| || || ||
Sbjct 95654 CGGTATCGGTCTCTCCATCCACAACATCCGAGCCACCGGCTCCTACATTGCCGGCACCAA 95713
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| || | ||||| | || ||||| || || | ||| ||| || || || ||
Sbjct 95714 CGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACTGCCCGATACGT 95773
Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| || ||| | | | ||| ||| | | || | || |||||||| ||||
Sbjct 95774 GGACCA----GGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTTGAGCCCTGGC 95829
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
||| || ||| | |||||| ||| |||| ||||| || | |||||| ||
Sbjct 95830 ACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAGGAGATTCGAG 95889
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
||| || || ||| || || ||||| || ||||| |||||| || |||| ||| |||
Sbjct 95890 CCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCTGTTCATGGAGCGAGTCGAGCAGA 95949
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
| | | ||| ||||| | || || || || || ||||| ||| | | || |
Sbjct 95950 ACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGTCCCGGTCTGGACGACGTCTACGGCG 96009
Query 104814 AGGAGTTTGAAGCC-CTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA-CGGT 104871
| ||||| |||| || ||| |||||||| | || || || | | | ||| | |
Sbjct 96010 ACGAGTTC-AAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAG-GTCGACGAACCAT 96067
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
|| || | || | ||||| | |||||| | | || |||||| | |||| || |
Sbjct 96068 CCCCGCC-CAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGTAACCCCT 96126
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| || || || |||| |||| || || ||||| | || ||||
Sbjct 96127 TCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACCATCA 96186
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
|| |||||| || || || || | || | | |||||| |||||| |
Sbjct 96187 AGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTCTTCTCCCGATGAGGTGGCTGTTT 96246
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACA--AAGACATTTG 105107
| ||||| || || || || || |||| | ||| || ||| |||| || | ||
Sbjct 96247 GCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCACTCGAGACGACACCAACTCCTTCT 96306
Query 105108 ATTA--TGAAAAA-CTCCACGAAGTTACGAAAACTGTCACCAA---AAACCTAAACAGAG 105161
| | | || || || ||||| | | ||| |||| |||||| |||
Sbjct 96307 ACGACTTCAAGAAGCTGCACGATATCGCCAAA---GTCATTGTGCGAAACCTCAACGCCA 96363
Query 105162 TTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACC 105218
|||| || |||| | ||||||||| ||| || || || || ||| |||| |
Sbjct 96364 TTATCGACCGAAACTACTACCCCGTTCCCGAG---GCAAAGAAGTCCAACATGCGACATC 96420
Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCA 105277
| || |||| ||| |||||||||||||| || || ||||| || || || | |
Sbjct 96421 GACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTCATGGCTCTG-CGACTTCCC 96479
Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337
||||| || | ||| || ||| | |||| | || || |||||||| || ||||
Sbjct 96480 TTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGA 96539
Query 105338 GCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397
|| | ||||| || ||| |||| | || ||| | || || ||||| ||||
Sbjct 96540 GCCGTCGAGGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGC 96599
Query 105398 TCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGC 105452
||||| || || || ||| | ||||| ||||| ||| |||| |||| || |||
Sbjct 96600 TCTCCTGCCTC-CAGGGGAGACCTTCAGTTTGACCTGT-GGAACGTGACTCCCTCCGAGC 96657
Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512
|| | || ||||| | ||| |||| |||| | ||| ||| | || ||| |
Sbjct 96658 TT---TGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACCGGTATGCGAAACTCGC 96714
Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572
| || | ||||| ||||| || ||||||||| | || || | || || || ||||
Sbjct 96715 TGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTCGGCTTCAACGAGTGCT 96774
Query 105573 TTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 105631
| || |||||||| | ||||| || ||| || || || || || ||||| ||||
Sbjct 96775 TCGAGCCCTACACCTCCAACATTTACTCT-CGACGAGTGCTTGCTGGCGAGTTCCAGATT 96833
Query 105632 GTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691
|||||| || | | ||||| ||| ||||||| ||| || ||||||
Sbjct 96834 GTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAATGAGACCATGAAG 96893
Query 105692 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATT 105751
| | || ||| | || ||| | || || || | || || | || ||
Sbjct 96894 AACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC 96953
Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 105811
||| | ||||||| || || ||||| || | |||| |||| || ||||| ||
Sbjct 96954 AAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCGAATCATCGAGATGGCTGCC 97013
Query 105812 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGT-----ATGAATCTCTTCATGGAAAGTC 105866
|| || | ||||||||| | |||| ||| | | || | ||| ||| |
Sbjct 97014 GACCGATCGCCCTTCATTGACC--AGTCCCAGTCCCTCAACATTCACATCAAGGA---CC 97068
Query 105867 CAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGG 105926
| || ||| ||||||| | || |||||| | ||| | ||||||||||||||||| || |
Sbjct 97069 CCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACTG 97128
Query 105927 GGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974
| ||||| ||||| ||| | | ||| || ||| || |||||||
Sbjct 97129 GTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCA 97176
>seq3
Length=1361780
Score = 140 bits (154), Expect = 4e-28
Identities = 173/235 (74%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782
|||||| | || | || || || | ||||| || || |||||| | |||||| || |
Sbjct 14682 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATT--T 14739
Query 94783 ACAAAGTCGCGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840
| | | | || | ||||| ||||| ||| | || ||||| || ||||||||||
Sbjct 14740 CCGACGAGGAGTCCACCTTTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCT 14799
Query 94841 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900
| ||||| || || ||| | | || | |||||||||||||||||||||||||| || |
Sbjct 14800 TTTTCTCAGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 14859
Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|| ||||||||||||||| || ||||| |||||||| || ||| || |||||
Sbjct 14860 TCACCTTCTCCAACGAGCTCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGC 14914
>seq1
Length=2434256
Score = 113 bits (124), Expect = 5e-20
Identities = 325/492 (66%), Gaps = 15/492 (3%)
Strand=Plus/Minus
Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373
||||| ||||| | |||||||| |||||||| || || || | ||| | ||
Sbjct 1214094 GTTCACACACGCTTCTCCAACCCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTC 1214035
Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433
||||| || |||||| | || ||||| ||| |||| ||||| | ||||| |
Sbjct 1214034 CTGCTTTCTGGTCGCCATGAGCGAAGACTCCATCGACGGCATCTACGACACTCTCAAAAC 1213975
Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 104493
||| || ||||| |||||| || || || || || |||| ||||| | | |||||
Sbjct 1213974 GTGCGCCCAAATTTCAAAGACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGC 1213915
Query 104494 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 104553
|| | || || | | || |||| || ||| |||| ||||| ||
Sbjct 1213914 TAAGGGCACCATCATCACAGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCG 1213855
Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATC 104607
|| || || |||||| | || || | |||| || ||||| ||| |
Sbjct 1213854 AGTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACAAGCGTCCT---GGAGC 1213798
Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGT-TGCGTC 104666
| |||||||| | ||||||||||| |||||||| |||| ||| |||| | ||||
Sbjct 1213797 GTTTGCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGATTTC-TTGAATCTGCGCA 1213739
Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCA 104725
||||| || | |||||| | | || || |||||||| | ||| | ||| ||||
Sbjct 1213738 AAAACCACGGAGCCGAGGAAAA-CAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCC 1213680
Query 104726 GATCTCTTCATGAAGAGAGTTG-AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAA 104784
||||| |||||||||||||| | | ||| | | || ||||| || || ||||| | ||
Sbjct 1213679 GATCTGTTCATGAAGAGAGTCGAAAGAG-GCGAGAAATGGTCGCTTTTCTGTCCCAAAAA 1213621
Query 104785 GGCACCTGGTCT 104796
||| || || ||
Sbjct 1213620 GGCTCCCGGACT 1213609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260479206560
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