Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq24 232 8e-56 seq3 140 4e-28 seq1 113 5e-20 >seq24 Length=170883 Score = 232 bits (256), Expect = 8e-56 Identities = 1143/1788 (64%), Gaps = 61/1788 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| ||||||| ||| || |||| || || || || ||||||| | | Sbjct 95415 CCCCAGCAGATGATCATGCGAGTGTCCGTCGGAATCCACGGTGACGACATTGCCCGAGCC 95474 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| || | ||| || | ||||| | || ||||||| Sbjct 95475 ATCGAGACCTACAACTACATGTCTCAGAAGTACTTT-ACCCACGCTTCCCCCACCCTCTA 95533 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| ||||| || || ||||| ||||| || |||||| || || ||||| || Sbjct 95534 CAACGCTGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGA 95593 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||| ||||| | || || | | ||||| | || || |||| ||||| Sbjct 95594 CTCCATCGACGGCATCTACGATACCCTCAAGACCTGTGCTCTGATTTCCAAGTCTGCTGG 95653 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || | |||||| | | |||||| || ||| || || || Sbjct 95654 CGGTATCGGTCTCTCCATCCACAACATCCGAGCCACCGGCTCCTACATTGCCGGCACCAA 95713 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | ||||| | || ||||| || || | ||| ||| || || || || Sbjct 95714 CGGAACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACTGCCCGATACGT 95773 Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | || ||| | | | ||| ||| | | || | || |||||||| |||| Sbjct 95774 GGACCA----GGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTTGAGCCCTGGC 95829 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 ||| || ||| | |||||| ||| |||| ||||| || | |||||| || Sbjct 95830 ACGACGACATCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGAAAGGAGGAGATTCGAG 95889 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| || || ||||| || ||||| |||||| || |||| ||| ||| Sbjct 95890 CCCGAGACCTGTTCCTGGCCCTGTGGATCCCCGATCTGTTCATGGAGCGAGTCGAGCAGA 95949 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 | | | ||| ||||| | || || || || || ||||| ||| | | || | Sbjct 95950 ACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGTCCCGGTCTGGACGACGTCTACGGCG 96009 Query 104814 AGGAGTTTGAAGCC-CTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGA-CGGT 104871 | ||||| |||| || ||| |||||||| | || || || | | | ||| | | Sbjct 96010 ACGAGTTC-AAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAG-GTCGACGAACCAT 96067 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || || | || | ||||| | |||||| | | || |||||| | |||| || | Sbjct 96068 CCCCGCC-CAGAAGCTGTGGTACCACATTCTCGACTGCCAGACCGAGTCCGGTAACCCCT 96126 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || || || |||| |||| || || ||||| | || |||| Sbjct 96127 TCATGCTCTACAAGGATGCTTGCAACCGAAAGTCCAACCAGAAGAACCTCGGAACCATCA 96186 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || |||||| || || || || | || | | |||||| |||||| | Sbjct 96187 AGTCTTCCAACCTGTGCTGCGAGATTGTCGAGTACTCTTCTCCCGATGAGGTGGCTGTTT 96246 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACA--AAGACATTTG 105107 | ||||| || || || || || |||| | ||| || ||| |||| || | || Sbjct 96247 GCAACCTGGCCTCCATTGCCCTGCCCACCTTTGTCACTCGAGACGACACCAACTCCTTCT 96306 Query 105108 ATTA--TGAAAAA-CTCCACGAAGTTACGAAAACTGTCACCAA---AAACCTAAACAGAG 105161 | | | || || || ||||| | | ||| |||| |||||| ||| Sbjct 96307 ACGACTTCAAGAAGCTGCACGATATCGCCAAA---GTCATTGTGCGAAACCTCAACGCCA 96363 Query 105162 TTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACC 105218 |||| || |||| | ||||||||| ||| || || || || ||| |||| | Sbjct 96364 TTATCGACCGAAACTACTACCCCGTTCCCGAG---GCAAAGAAGTCCAACATGCGACATC 96420 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCA 105277 | || |||| ||| |||||||||||||| || || ||||| || || || | | Sbjct 96421 GACCTATTGCTCTGGGTGTTCAGGGTCTGGCCGACACCTTCATGGCTCTG-CGACTTCCC 96479 Query 105278 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCC 105337 ||||| || | ||| || ||| | |||| | || || |||||||| || |||| Sbjct 96480 TTTGAGTCTGCCGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGA 96539 Query 105338 GCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 || | ||||| || ||| |||| | || ||| | || || ||||| |||| Sbjct 96540 GCCGTCGAGGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAGACCTTCCAGGGC 96599 Query 105398 TCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA----GACCAAGC 105452 ||||| || || || ||| | ||||| ||||| ||| |||| |||| || ||| Sbjct 96600 TCTCCTGCCTC-CAGGGGAGACCTTCAGTTTGACCTGT-GGAACGTGACTCCCTCCGAGC 96657 Query 105453 TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512 || | || ||||| | ||| |||| |||| | ||| ||| | || ||| | Sbjct 96658 TT---TGGGAGTGGGACGATCTTAAGGCCAATATCATGAAGACCGGTATGCGAAACTCGC 96714 Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572 | || | ||||| ||||| || ||||||||| | || || | || || || |||| Sbjct 96715 TGCTGGTTGCTCCCATGCCCACCGCCTCCACCTCTCAGATTCTCGGCTTCAACGAGTGCT 96774 Query 105573 TTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATT 105631 | || |||||||| | ||||| || ||| || || || || || ||||| |||| Sbjct 96775 TCGAGCCCTACACCTCCAACATTTACTCT-CGACGAGTGCTTGCTGGCGAGTTCCAGATT 96833 Query 105632 GTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691 |||||| || | | ||||| ||| ||||||| ||| || |||||| Sbjct 96834 GTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAATGAGACCATGAAG 96893 Query 105692 GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATT 105751 | | || ||| | || ||| | || || || | || || | || || Sbjct 96894 AACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC 96953 Query 105752 AAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCA 105811 ||| | ||||||| || || ||||| || | |||| |||| || ||||| || Sbjct 96954 AAGGACCTGTACCGAACCGTGTGGGAGATTTCGCAGAAGCGAATCATCGAGATGGCTGCC 97013 Query 105812 GATCGTGGTCGCTTCATTGATCAAAGTCAAAGT-----ATGAATCTCTTCATGGAAAGTC 105866 || || | ||||||||| | |||| ||| | | || | ||| ||| | Sbjct 97014 GACCGATCGCCCTTCATTGACC--AGTCCCAGTCCCTCAACATTCACATCAAGGA---CC 97068 Query 105867 CAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGG 105926 | || ||| ||||||| | || |||||| | ||| | ||||||||||||||||| || | Sbjct 97069 CCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACTG 97128 Query 105927 GGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 | ||||| ||||| ||| | | ||| || ||| || ||||||| Sbjct 97129 GTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCA 97176 >seq3 Length=1361780 Score = 140 bits (154), Expect = 4e-28 Identities = 173/235 (74%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || | || || || | ||||| || || |||||| | |||||| || | Sbjct 14682 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCAAGTGGATT--T 14739 Query 94783 ACAAAGTCGCGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840 | | | | || | ||||| ||||| ||| | || ||||| || |||||||||| Sbjct 14740 CCGACGAGGAGTCCACCTTTGGCGAGCGGCTCATTGCCTTTGCCGCCGTCGAGGGTATCT 14799 Query 94841 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 | ||||| || || ||| | | || | |||||||||||||||||||||||||| || | Sbjct 14800 TTTTCTCAGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 14859 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||||||||| || ||||| |||||||| || ||| || ||||| Sbjct 14860 TCACCTTCTCCAACGAGCTCATTTCTCGAGACGAGGGTCTGCACACCGACTTTGC 14914 >seq1 Length=2434256 Score = 113 bits (124), Expect = 5e-20 Identities = 325/492 (66%), Gaps = 15/492 (3%) Strand=Plus/Minus Query 104314 GTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAG 104373 ||||| ||||| | |||||||| |||||||| || || || | ||| | || Sbjct 1214094 GTTCACACACGCTTCTCCAACCCTGTTCAATGCAGGCACTCCCCGGGGCCAGCTATCGTC 1214035 Query 104374 TTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGA 104433 ||||| || |||||| | || ||||| ||| |||| ||||| | ||||| | Sbjct 1214034 CTGCTTTCTGGTCGCCATGAGCGAAGACTCCATCGACGGCATCTACGACACTCTCAAAAC 1213975 Query 104434 GTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGC 104493 ||| || ||||| |||||| || || || || || |||| ||||| | | ||||| Sbjct 1213974 GTGCGCCCAAATTTCAAAGACCGCAGGAGGCATAGGTCTGCATATCCACAACATCAGAGC 1213915 Query 104494 CAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCG 104553 || | || || | | || |||| || ||| |||| ||||| || Sbjct 1213914 TAAGGGCACCATCATCACAGGCTCTCAGGGAAAATCCTCAGGCATTGTTCCCATGCTCCG 1213855 Query 104554 CGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATC 104607 || || || |||||| | || || | |||| || ||||| ||| | Sbjct 1213854 AGTGTTCAATAACACAGCCAGATACGTGGACCAAGGCGGCAACAAGCGTCCT---GGAGC 1213798 Query 104608 TATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGT-TGCGTC 104666 | |||||||| | ||||||||||| |||||||| |||| ||| |||| | |||| Sbjct 1213797 GTTTGCAGTCTACTTGGAGCCATGGCATGCGGATATTTTGGATTTC-TTGAATCTGCGCA 1213739 Query 104667 TCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCA 104725 ||||| || | |||||| | | || || |||||||| | ||| | ||| |||| Sbjct 1213738 AAAACCACGGAGCCGAGGAAAA-CAGAGCACGTGATCTCTTTTACGCATTATGGGTTCCC 1213680 Query 104726 GATCTCTTCATGAAGAGAGTTG-AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAA 104784 ||||| |||||||||||||| | | ||| | | || ||||| || || ||||| | || Sbjct 1213679 GATCTGTTCATGAAGAGAGTCGAAAGAG-GCGAGAAATGGTCGCTTTTCTGTCCCAAAAA 1213621 Query 104785 GGCACCTGGTCT 104796 ||| || || || Sbjct 1213620 GGCTCCCGGACT 1213609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260479206560