Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq24 262 4e-65
seq14 192 7e-44
seq4 190 2e-43
seq3 187 3e-42
seq1 93.3 5e-14
>seq24
Length=170883
Score = 262 bits (290), Expect = 4e-65
Identities = 1122/1749 (64%), Gaps = 53/1749 (3%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| |||||||| || |||||||| ||||||||||||||||| | |||||| ||
Sbjct 97147 GTTCGCAGGTAGTACATACCAGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAG 97088
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||||||| | | ||||||| || ||| ||||| || ||||| ||||| |||
Sbjct 97087 GTGAGCTTGCCCATGGTGGGGTCCTTGATGTGAATGTTGAGGGACTGGGACTGGTCAATG 97028
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217
|| | | || || || ||||| || || ||| ||| || | ||| ||||| || ||
Sbjct 97027 AAGGGCGATCGGTCGGCAGCCATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTT 96968
Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCG 80271
|| |||| |||| | ||||| || |||| | || ||||| || |
Sbjct 96967 CGGTACAGGTCCTTG---ATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTG 96911
Query 80272 TCCTTTACAATTTGATTTTTCAAT-TCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330
|| || ||| | || |||| || | |||| | ||||| || ||| || ||
Sbjct 96910 TCGGCCACGATTCGGTTCTTCATGGTCTCAT-TCCACAGACCAACCTCAACCAGGTCCTT 96852
Query 80331 CACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACA 80386
| || | | ||| |||| || |||| || || || || || ||| || |
Sbjct 96851 GAGCAGCCAGGGGTTGACAATCTGGA---ACTCGCCAGCAAGCACTCGTCG-AGAGTAAA 96796
Query 80387 GGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCG 80446
||| | ||||| ||||| || ||||||| ||||| ||||||| ||| || |
Sbjct 96795 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAGGTGGAGGCGG 96736
Query 80447 TCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA 80506
| ||||| || | |||| ||| || || |||| ||| |||| |||||| | |
Sbjct 96735 TGGGCATGGGAGCAACCAGCAGCGAGTTTCGCATACCGGTCTTCATGATATTGGCCTTAA 96676
Query 80507 AATCTGACCAAAAATCAA--CCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAGATG 80562
||| | || | ||| | | | | || || ||||| ||| ||| | |
Sbjct 96675 GATC-GTCCCACTCCCAAAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGAAGGTCT 96617
Query 80563 CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG-GCCAGCTC 80621
||| || || ||||| ||| ||| |||||||| | || ||| || | |||| |||
Sbjct 96616 CCCCTGGAGGCAGGAGAGCCCTGGAAGGTCTCGTAGGCACCGTCC-TCAAGAGCCATCTC 96558
Query 80622 ACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA-CACCGC 80680
| || || | ||| |||| || ||| ||| |||| |||| | | |
Sbjct 96557 GTAAGAGGCCTCGACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTT 96498
Query 80681 GCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAA 80740
| |||| | || || | | | || |||||| ||| ||||| |||||||
Sbjct 96497 G-GCCTCGGCAGACTCAAAGGGAAGTCGCAGAGCCATGAAGGTGTCGGCCAGACCCTGAA 96439
Query 80741 CGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAA 80800
| || | || || || || || ||| |||| || || ||||| |||| |||||
Sbjct 96438 CACCCAGAGCAATAGGTCGATGTCGCATGTTGGACTTCTTTGCCTCGGGAACGGGGTAGT 96379
Query 80801 AGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTT 80860
|||| ||||| | | ||| ||||| || || || | | ||| || || |
Sbjct 96378 AGTTTCGGTCGATAATGGCGTTGAGGTTTCGCACAATGACTTTGGCGATATCGTGCAGCT 96319
Query 80861 TCTGAAAGTCGAA-------TTGGT-TCCCCT----TCACAAATGCCGGAAGGCTCAGGG 80908
||| |||||| | ||||| || || | ||||| | || ||| | ||
Sbjct 96318 TCTTGAAGTCGTAGAAGGAGTTGGTGTCGTCTCGAGTGACAAAGGTGGGCAGGGCAATGG 96259
Query 80909 ACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACA 80968
| ||||| ||||| || |||||||| || | | | ||||||| || || |||||
Sbjct 96258 AGGCCAGGTTGCAAACAGCCACCTCATCGGGAGAAGAGTACTCGACAATCTCGCAGCACA 96199
Query 80969 AATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCT 81028
|| |||||||| || || || ||||| |||||||| ||||| ||||||||| ||||
Sbjct 96198 GGTTGGAAGACTTGATGGTTCCGAGGTTCTTCTGGTTGGACTTTCGGTTGCAAGCATCCT 96139
Query 81029 TGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCT 81088
||||| |||| | ||| |||||| |||| ||| | | ||| ||| || ||| | ||
Sbjct 96138 TGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCAGTCGAGAATGTGGTACCACAGCT 96079
Query 81089 CGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCG 81147
| || || || | ||| || | | |||| |||| |||| |
Sbjct 96078 TCTGGGCGGGGATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCT 96019
Query 81148 TCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGC 81207
| ||||| | | |||| | || || | || |||||||| |||||||| || |
Sbjct 96018 T-GAACTCGTCGCCGTAGACGTCGTCCAGACCGGGACACTCGTTGGGGCACATGAGAGTC 95960
Query 81208 CAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267
|| |||| || | ||| || || |||||| || |||||||| ||||| ||||
Sbjct 95959 CACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGATCGGGGATCCACAGGGCCAGGAAC 95900
Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327
||||| ||| || |||||| | || ||||| |||| |||| || || | |
Sbjct 95899 AGGTCTCGGGCTCGAATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAG 95840
Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------GCCA 81381
||||| | ||||| ||||| || |||| ||| | | || | | || |||
Sbjct 95839 ATGTCGTCGTGCCAGGGCTCAAGGTACATGGCAAAGGCTCC---GGGTCGCTTGTTGCCT 95783
Query 81382 CCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCT 81441
||||||| ||||| |||||||| ||| | ||||||| ||| || | |||||| |
Sbjct 95782 CCCTGGTCCACGTATCGGGCAGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTG 95723
Query 81442 GACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGA 81501
|| ||||| || || | || || || |||| || | ||| ||| || |||
Sbjct 95722 GAGGTTCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGGATGTTGTGGATGGAGAGA 95663
Query 81502 CCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCC 81561
||||| || || | |||| |||||| ||||||| || | ||| || || || ||
Sbjct 95662 CCGATACCGCCAGCAGACTTGGAAATCAGAGCACAGGTCTTGAGGGTATCGTAGATGCCG 95603
Query 81562 TCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG 81621
|||||| || | ||||||| | | |||||| |||||||| ||||| |
Sbjct 95602 TCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTG-GGGCTGGGGGGT 95544
Query 81622 -CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680
|| || ||| | || || |||| ||||| | || || | ||||| || ||
Sbjct 95543 TCCAGCGTTGTAGAGGGTGGGGGAAGCGTGGGTAAAGTACTTCTGAGACATGTAGTTGTA 95484
Query 81681 GGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACAT 81740
||| || || | || | ||| ||||||||||| || |||| | || ||||| | |||
Sbjct 95483 GGTCTCGATGGCTCGGGCAATGTCGTCACCGTGGATTCCGACGGACACTCGCATGATCAT 95424
Query 81741 GTACTGGGG 81749
| ||||||
Sbjct 95423 CTGCTGGGG 95415
>seq14
Length=605277
Score = 192 bits (212), Expect = 7e-44
Identities = 168/209 (80%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct 299935 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 299876
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| ||||||||||||||||||||||| || ||||||
Sbjct 299875 GACACCATTGACAATGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 299816
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||||||||| ||||| || ||||| | || ||||| | ||||| ||
Sbjct 299815 CAGCGACTGATTTTTGCTGGAAAGCAGCTTGAGGACGGCCGAACCCTCTCTGACTACAAC 299756
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| |||||||| ||||| ||
Sbjct 299755 ATCCAGAAGGAGTCCACTCTCCATCTGGT 299727
Score = 140 bits (154), Expect = 4e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27439 ACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAG 27498
|| ||||| |||||||| ||||| ||| | ||| | || | ||| | || ||||||
Sbjct 298956 ACCATTACCCTTGAGGTCGAGTCTTCTGACACCATCGACAACGTCAAGTCCAAGATTCAG 298897
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||| || || || ||||||||||| || || || || |||||||| || |||
Sbjct 298896 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGACTTATCTTCGCCGGTAAGCAGCTGGAG 298837
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||| ||||| | ||||| || |||| |||||||||||||| || || || |
Sbjct 298836 GACGGTCGAACCCTTTCCGACTACAACATCCAGAAGGAATCCACTCTCCACCTTGTGCTC 298777
Query 27619 CGTCTTCGCGGTGGACA 27635
|| || || ||||| ||
Sbjct 298776 CGACTCCGAGGTGGCCA 298760
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543
||| | || || |||||||||||||| ||||| || ||||||||||| || ||||| |||
Sbjct 300085 AAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGACTGATTTTCGCT 300026
Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603
|| ||||| || ||||||| ||| || || | || || || |||| ||||| || ||
Sbjct 300025 GGAAAGCAGCTTGAGGATGGTCGAACTCTCTCTGATTACAACATCCAGAAGGAGTCTACC 299966
Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| || | || ||||| |||||
Sbjct 299965 CTTCATCTGGTTCTCCGACTTCGAGGTGG 299937
>seq4
Length=1325655
Score = 190 bits (210), Expect = 2e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||||||||| |||||||| |||||||| || |||||||| |||||
Sbjct 386585 AATGCAGATCTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 386644
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | || | ||| | || || |||||||||||||||||||| || |||||
Sbjct 386645 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 386704
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || || || |||||||| |||||||| | || ||||| | ||||| ||
Sbjct 386705 GCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAA 386764
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||||| || |||| || || |||||
Sbjct 386765 CATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGTGG 386812
>seq3
Length=1361780
Score = 187 bits (206), Expect = 3e-42
Identities = 181/233 (78%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459
|| ||| ||||||||||||||||||| ||||| ||||||||||| || || ||||| |||
Sbjct 557639 ACAATAGTGCAAATCTTTGTCAAGACCCTTACTGGCAAGACTATCACCCTCGAGGTGGAG 557698
Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
|| ||| | ||||| || | ||| | || || ||||||||||||||||| || ||
Sbjct 557699 TCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCG 557758
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
||||||||||| || ||||| || || ||||| |||||||| | || || || | |||
Sbjct 557759 GACCAGCAGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGAC 557818
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || |||| ||||| |||||||| ||||| || |||| || || || ||
Sbjct 557819 TACAACATCCAGAAGGAGTCCACTCTCCATCTGGTTCTGCGACTCCGAGGAGG 557871
>seq1
Length=2434256
Score = 93.3 bits (102), Expect = 5e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 80875 TGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCT 80934
|||||| ||||||||| | || || || ||| ||||| ||||| || |||||||||
Sbjct 1213309 TGGTTCAGCTTCACAAACTCAGGCAGCGCCACGGAAGCCAGGTTGCAAACAGCCACCTCT 1213368
Query 80935 TCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGG 80994
|| | | | ||| ||| || || ||||||| ||| || || || || || || ||
Sbjct 1213369 TCGGGAGACGAGTACTGGACAATCTCAGTGCACAGATTGGACGATTTGATGGTGCCGAGA 1213428
Query 80995 TTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGG 81045
|| |||||||| || || |||||||| ||| || || |||| |||||
Sbjct 1213429 TTCTTCTGGTTGGATTTCGCGTTGCAGCTGTCTTTATACAGCATGAACGGG 1213479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310086329280
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