Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq10 192 5e-44
>seq10
Length=1040050
Score = 192 bits (212), Expect = 5e-44
Identities = 406/605 (67%), Gaps = 22/605 (4%)
Strand=Plus/Plus
Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTC 29931
|||||| | ||||||| |||| ||| ||||| ||||| |||| | ||||||| | |||
Sbjct 846390 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTC 846449
Query 29932 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29991
|| || || | || || || || ||||| ||| | |||| ||| ||| ||
Sbjct 846450 GCCGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAAT 846509
Query 29992 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 30051
||| ||||| ||||| || |||| ||| | |||| |||||| ||||| ||||| || |
Sbjct 846510 GTTGAAGGGCACCCCCAGTCCCAGGTCACAGGACCGCTGGTACAGCTGGCACGACAGTTG 846569
Query 30052 TCCGTCGCTC------------------ACGTAAAACTGACACATGGCGTGGCACGGAGG 30093
||| | || ||||| |||||||| | |||||| |||||
Sbjct 846570 GCCGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAGG 846629
Query 30094 AAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 30153
|||||||| | | || |||||||| || ||| ||||| || | ||| |
Sbjct 846630 CAGAGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCTG 846689
Query 30154 TGGGTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 30212
|||||| | ||| ||| || | | | || |||||||||||| ||| |||| ||
Sbjct 846690 AGGGTTGGTTTTGA-GAGTGTGAATCACCTGTTTCAGCTGATCCACGCCCTGGCCCGTGT 846748
Query 30213 AGTCTG-CCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30271
|||||| | || |||| ||||||||||||||||||| | ||| || || ||||| ||
Sbjct 846749 AGTCTGTGTCGCA-GTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAGACG 846807
Query 30272 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30331
|||||||| || || ||| | ||| | | || ||| |||| ||| || ||||
Sbjct 846808 GGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTTGGAT 846867
Query 30332 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCT 30391
|| ||| |||||||||| | | ||||| || | ||| || ||| ||||
Sbjct 846868 CCATTGCCGTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTCTTGCCGTCAGTGCACCCG 846927
Query 30392 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 30451
|| ||||||| |||||||||| ||| || ||||||||| || || || |
Sbjct 846928 GCCACAAACCACAAAAGCTCCTCCAACACGCCCCGGTAAAAGACCCGTTTTGTGGTCAAC 846987
Query 30452 AGGGG 30456
|||||
Sbjct 846988 AGGGG 846992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310182116048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |