Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq10 132 4e-26 >seq10 Length=1040050 Score = 132 bits (146), Expect = 4e-26 Identities = 390/609 (64%), Gaps = 34/609 (6%) Strand=Plus/Plus Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705 |||| | |||||||| || ||| ||||| || || |||| ||||||||| | ||| | Sbjct 846392 TCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTCGC 846451 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 | || || | || || || || ||||| ||| | |||| ||| ||| |||| Sbjct 846452 CGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAATGT 846511 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTC 29825 | ||||||||||| || |||| ||| | |||| |||||| ||||||||||| || | | Sbjct 846512 TGAAGGGCACCCCCAGTCCCAGGTCACAGGACCGCTGGTACAGCTGGCACGACAGTTGGC 846571 Query 29826 CGTCGCT------------------CACGTAAAACTGAC---ACATGGCATGGCACGGAG 29864 || | | |||||| ||||||| ||||| ||||| |||| Sbjct 846572 CGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATG---TGGCAGGGAG 846628 Query 29865 GAAGGGCCAT----GAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTG 29920 | || ||||| ||| | || |||||||| || ||| ||||| || | | Sbjct 846629 GCAGAGCCATCTTGGAG----AGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGG 846684 Query 29921 TCTTCTGGGTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCC 29979 || | |||||| | ||| ||| || | | | || |||||||||||| ||| || Sbjct 846685 TCCTGAGGGTTGGTTTTGA-GAGTGTGAATCACCTGTTTCAGCTGATCCACGCCCTGGCC 846743 Query 29980 CGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTA 30039 || |||||||| ||||||| | ||| || || ||||| Sbjct 846744 CGTGTAGTCTGTGTCGCAGTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTA 846803 Query 30040 CACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCT 30099 || |||||||| || || ||| | ||| | | || ||| |||| ||| || | Sbjct 846804 GACGGGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTT 846863 Query 30100 GGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA 30159 ||| || ||| |||||||||| | | |||||| || | ||| || ||| | Sbjct 846864 GGATCCATTGCCGTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTCTTGCCGTCAGTGCA 846923 Query 30160 CCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGT 30219 ||| || ||||||| |||||||||| ||| || ||||||||| || || || Sbjct 846924 CCCGGCCACAAACCACAAAAGCTCCTCCAACACGCCCCGGTAAAAGACCCGTTTTGTGGT 846983 Query 30220 GAGGAGGGG 30228 | ||||| Sbjct 846984 CAACAGGGG 846992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162982194984