Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq10 201 8e-47
seq1 86.0 5e-12
>seq10
Length=1040050
Score = 201 bits (222), Expect = 8e-47
Identities = 409/605 (68%), Gaps = 22/605 (4%)
Strand=Plus/Plus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
|||||| | |||||||||||| ||| ||||| ||||| |||| ||||||||| | |||
Sbjct 846390 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGCGCGTCGCCCATGGTGTGGACGAGCTC 846449
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
|| || || | || || || || ||||| ||| | |||| ||| ||| ||
Sbjct 846450 GCCGCAGTCCAGATCCGTCACCTGCGCAATCATCCGCGTCAACAGAGCGTACGAGGCAAT 846509
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 27317
||| ||||| ||||| || |||| ||| | |||| |||||| ||||| ||||| || |
Sbjct 846510 GTTGAAGGGCACCCCCAGTCCCAGGTCACAGGACCGCTGGTACAGCTGGCACGACAGTTG 846569
Query 27318 TCCATCG-----------CTT-------ACGTAAAACTGACATATGGCGTGGCACGGAGG 27359
|| | ||| ||||| |||||||| | |||||| |||||
Sbjct 846570 GCCGCGGTTCTTGTTCTTCTTGTACGACACGTAGAACTGACAGAACATGTGGCAGGGAGG 846629
Query 27360 AAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 27419
|||||||| | | || |||||||| || ||| ||||| || | ||| |
Sbjct 846630 CAGAGCCATCTTGGAGAGATCCGCAGGGTTCCATGCCGACAGAATGATTCGGCGGTCCTG 846689
Query 27420 TGGGTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478
|||||| | ||| ||| || | | | || |||||||||||| ||| |||| ||
Sbjct 846690 AGGGTTGGTTTTGA-GAGTGTGAATCACCTGTTTCAGCTGATCCACGCCCTGGCCCGTGT 846748
Query 27479 AGTCTACC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACC 27537
||||| | || |||| ||||||||||||||||||| | |||||| || ||||| ||
Sbjct 846749 AGTCTGTGTCGCA-GTCCTTGTACTCTGCTCCGAAATGGCGCCATTGAAAGCCGTAGACG 846807
Query 27538 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 27597
|||||||| || || ||| | ||| | | || ||| |||| ||| || ||||
Sbjct 846808 GGTCCCAGATCGCCTTCTCGTCGGTGGCCCAGTCCGGCCTTTTCCAGAAACTCCTTGGAT 846867
Query 27598 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 27657
|| ||| |||||||||| | | |||||| || | ||| || ||| ||||
Sbjct 846868 CCATTGCCGTCCCAGATGTGAATGTTTTTCTCGCTCAGTTTCTTGCCGTCAGTGCACCCG 846927
Query 27658 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 27717
|| ||||||| |||||||||| ||| || ||||||||| || || || |
Sbjct 846928 GCCACAAACCACAAAAGCTCCTCCAACACGCCCCGGTAAAAGACCCGTTTTGTGGTCAAC 846987
Query 27718 AGGGG 27722
|||||
Sbjct 846988 AGGGG 846992
>seq1
Length=2434256
Score = 86.0 bits (94), Expect = 5e-12
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567
|||||||||| | || | ||| ||| | ||| |||| || ||||||||||| || |
Sbjct 1009165 TCGTCAAGGTCCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCTC 1009224
Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC-CAGGAGGACATGCCCTTCGA 48626
|||||| || ||||| || ||| | | | | | || ||||| |||||||||
Sbjct 1009225 GTCACGGA-CAGAAGGGTACCATTGGTGT-GACTTATCGACACGAGGATATGCCCTTCTC 1009282
Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686
|| || || || ||||| |||||||||||||||||||| ||||||| | |||||
Sbjct 1009283 TGCTGAGGGAGTTGTCCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTATGAC 1009342
Query 48687 CGT 48689
|||
Sbjct 1009343 CGT 1009345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507001851764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |