Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01] 44 sequences; 20,877,144 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq6 105 3e-18 >seq6 Length=1274382 Score = 105 bits (116), Expect = 3e-18 Identities = 193/283 (68%), Gaps = 0/283 (0%) Strand=Plus/Plus Query 30994 GCCACGGGATTCCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTC 31053 ||| || || |||| ||||| || ||||| |||||||| | ||||||| || || Sbjct 1059218 GCCTCGAGACACCATACACATATGGGACGCCTCGATGACCACGGCCACGCCCTGGGGCTC 1059277 Query 31054 CAGGTGCTCGAACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG 31113 || ||| |||| || || | ||| | || || || ||||| || ||||| || Sbjct 1059278 GAGAATCTCCCACAGCGCCATGGCCACCTGCTTAGTCAGACGCTCCTGGACCTGCAGACG 1059337 Query 31114 GCGAGCATACATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGG 31173 || | |||| || ||||| || | ||||||||| || |||| | || ||| || Sbjct 1059338 ACGGGAGAACATCTCTGCCAGACGTGCCAGCTTGCTGAGCCCCAGAACCCGCGAGTTGGG 1059397 Query 31174 AATGTAGCTGATCGTGACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTA 31233 ||||||| || || ||||||| | ||| ||||||| ||||| || | ||| | Sbjct 1059398 GATGTAGCCAATGTGGATTTTGCCGAAAAATGGCACGAGGTGGTGCTCACACAGCGAGAA 1059457 Query 31234 GATGGGGATGTCGCGCACCGTCACCATCTGGTCATGCTTCTCC 31276 ||| ||||||||||| | ||||| | ||| || | |||| Sbjct 1059458 GATTTCAATGTCGCGCACAATGACCATTTCGTCGTGGTCCTCC 1059500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289502141184