Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20deformans_20[genbank_20GCA_5F001600075.1_202016-03-01]
44 sequences; 20,877,144 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 7e-30
seq3 132 4e-26
>seq4
Length=1325655
Score = 145 bits (160), Expect = 7e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || ||||| || ||| ||||||||| ||||| |||||
Sbjct 386816 ACCACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 386757
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| ||||| || |||| ||||||||||| |||||||| || || ||||| |||||||
Sbjct 386756 AGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGG 386697
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810
||||| | |||||||||| ||| || ||| ||| | | | |||||| ||||
Sbjct 386696 GGGAATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACT 386638
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| | || || || ||||| || || ||||| || || ||||||||
Sbjct 386637 CCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAGATCTGCAT 386586
>seq3
Length=1361780
Score = 132 bits (146), Expect = 4e-26
Identities = 167/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||||| || ||| ||||||||| ||||| ||||| ||
Sbjct 557871 CCTCCTCGGAGTCGCAGAACCAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 557812
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||||||||| ||||| ||||| ||||||| |||
Sbjct 557811 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGG 557752
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| ||| | | | ||||| ||||||||
Sbjct 557751 ATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTGTCAGAGGACTCCAC 557693
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861
||| | || || || || || || || ||||| || || || ||||
Sbjct 557692 CTCGAGGGTGATAGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 557646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303745732800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |