Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 2e-23
seq1 123 5e-23
>seq3
Length=2716294
Score = 125 bits (138), Expect = 2e-23
Identities = 569/891 (64%), Gaps = 21/891 (2%)
Strand=Plus/Minus
Query 229759 TTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGG 229818
||||| ||||| || | ||| || ||| | |||||||||||||| | ||| ||||||||
Sbjct 857458 TTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG 857399
Query 229819 ACCACTGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAAAC---TCAAT 229875
||| | ||||| || ||| | ||| | | ||||||| ||||| | ||||
Sbjct 857398 ACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGG---GAGAACCGGCTCAAC 857342
Query 229876 GACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATT 229935
||||||| || |||||| ||| | || | || || || | ||||||||||||
Sbjct 857341 AACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATT 857282
Query 229936 GTGATGGAAAATCTGCAG-ACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCA 229994
|||| || || ||| | | | | | | | | | || ||| || ||||| |
Sbjct 857281 GTGAACGAGAACCTGGTGGAGCGATTCTCCGGCG-AGGTGCAGGTCCCCGAGGCCAAGTG 857223
Query 229995 ATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTGCTTAT 230054
|| || | | ||| | | | || ||||| || ||| || | ||||| ||
Sbjct 857222 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGAT 857163
Query 230055 CGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGCCATTGAAAACAT 230114
|||| | || ||| | || || | | | || || | ||||| || | |||
Sbjct 857162 CGACACATACATCAAGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCAT 857103
Query 230115 CCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGG--CTAGAAC--CTGGTAAAT 230170
||| | | || ||||| | ||||| | || ||| || || | || |
Sbjct 857102 CCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGAC 857043
Query 230171 CGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTT 230230
| |||| |||||| || | || | | || || || || | || ||||| |
Sbjct 857042 C-TTTGGCGAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGT 856984
Query 230231 TCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290
|| | ||||||| ||||| ||| |||| | ||||| |||||| | || ||||
Sbjct 856983 TCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACG 856924
Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAG 230349
|| ||||| || ||||||||||| || || | | || | | || | | || |
Sbjct 856923 AGCTCATCTCCCGAGACGAGGGTCTGCA-CACCGACTTTGCCTGTCTGCTCTTCTCGCAC 856865
Query 230350 CTCCAGAACAAGCTACCATTCGAGACG---GTCAAACAAATCATTACAGAAGCAGTTGAA 230406
||| ||||| | ||| | | ||| | ||| | | | ||| || || ||||
Sbjct 856864 CTCGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGT 856808
Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466
| ||| |||||||| | ||||| | || ||| | || | || |||||||| |
Sbjct 856807 ATCGAGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCAAG 856748
Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526
|| ||| | |||||||| || || || |||||||| | | ||||| || || ||
Sbjct 856747 CTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACTCC 856688
Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586
|| || |||||||| | |||||||| | || |||||| ||| ||||| || |||
Sbjct 856687 AAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAG 856628
Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||||||||| ||||| || ||||| |||| | | || || |||
Sbjct 856627 ACCAACTTCTTCGAGAAGCGGGTGTCCGACTACCAGAAGGCCGGCGTCATG 856577
Score = 118 bits (130), Expect = 2e-21
Identities = 213/309 (69%), Gaps = 7/309 (2%)
Strand=Plus/Minus
Query 319363 TCGGTAAGGGCGTAGTAA--CTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGAT 319420
||||| |||| |||||| || || || || ||| ||| || || |||| ||| |
Sbjct 942623 TCGGTCAGGGTGTAGTAGGCCTTGCCC--TCAGGTCGCACCTTGACAAAGTCGGCCAGGT 942566
Query 319421 TTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAG 319480
| |||||||| | |||||| ||| ||||| || ||| ||| || || |
Sbjct 942565 TACCCTTGTAGTAGACCAGCTTCTTGTTC---TCGTAGTGAGCAATGTCGGTACAGACGG 942509
Query 319481 CGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCA 319540
|||| ||||| |||||||||||||| ||||||| | | | ||| || || | ||
Sbjct 942508 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCCACCA 942449
Query 319541 GGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAA 319600
|||| || || |||| | ||||| |||| |||||||| || ||||| || || |
Sbjct 942448 GGTAGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCATCGAGCA 942389
Query 319601 GCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTC 319660
|||| | | || |||| |||||| || || || || | || ||||| ||||| ||||
Sbjct 942388 GCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCATCCTC 942329
Query 319661 CGGAAAGAG 319669
| || ||||
Sbjct 942328 CAGACAGAG 942320
>seq1
Length=3339266
Score = 123 bits (136), Expect = 5e-23
Identities = 134/175 (77%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 319857 GGGGAACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCC 319916
|||||| || |||| ||||||||| |||| || ||||||||||| || ||||| || ||
Sbjct 1183222 GGGGAAACCCTCAACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCACC 1183281
Query 319917 GTTTGGCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAA-CCGCGTGTTGTTCA 319975
||| || ||||| |||||||| || || || || | || ||| | | || |||||
Sbjct 1183282 GTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGA-GTCGAAGCTGGGTTCGGTTCA 1183340
Query 319976 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
| ||||| || |||| || |||||||| || ||||| | |||||||||||| ||
Sbjct 1183341 GCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCC 1183395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823444311830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |