Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 190 2e-43
>seq3
Length=2716294
Score = 190 bits (210), Expect = 2e-43
Identities = 572/876 (65%), Gaps = 23/876 (3%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 856593 TGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCC 856652
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || |||| || || | | | |
Sbjct 856653 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GAGTTGCCGAGAGCAACCAGCA 856710
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || ||||| || || || |||||||| | | | ||||||||| | ||||
Sbjct 856711 GACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGAC 856770
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911
|| || || || |||| || ||||| ||| |||| || || ||| | |
Sbjct 856771 CACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGT 856830
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|| | | || | || ||| ||| | | || || || | |||||| || ||
Sbjct 856831 CCTCGACAATCTT--CTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGCAAA 856888
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| || | |||||||||| | ||| || ||||| || || || | ||||||||
Sbjct 856889 GTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 856948
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
||||| ||||| | ||| || || | ||||||||| || || ||||| || |||||
Sbjct 856949 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTC 857008
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
||||| ||||| || || | || ||| | | |||| || | || ||||| ||
Sbjct 857009 GACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTT 857068
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207
|| |||| ||||| || | ||| ||||| || || || ||||| || || ||
Sbjct 857069 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 857128
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
||| || ||| |||| | || || || ||||| || || |||| |||| |
Sbjct 857129 GGTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCCG 857184
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| ||||| ||| || | | || |
Sbjct 857185 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGCA 857244
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || || ||||||| ||| | || || |||||||| || || ||| || || || |
Sbjct 857245 CCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGA 857304
Query 17388 ACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-----CCAGTC 17442
| |||| | ||| ||||| | |||| || ||| || | | ||||||
Sbjct 857305 AGGCCAGCACGTGCGAGATGAAGAACCGCTCGT-CGTTGT-TGAGCCGGTTCTCCCAGTC 857362
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
| || ||| | ||| | || |||| |||||| ||| |||| | ||||| ||
Sbjct 857363 GCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTT 857422
Query 17503 ATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
||||| | ||| || || | ||| || ||||||||
Sbjct 857423 GTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 857458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545334757880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |