Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 190 2e-43 >seq3 Length=2716294 Score = 190 bits (210), Expect = 2e-43 Identities = 572/876 (65%), Gaps = 23/876 (3%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || || || ||||| ||||| || ||||| | || || || |||||| Sbjct 856593 TGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCC 856652 Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || |||| || || | | | | Sbjct 856653 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GAGTTGCCGAGAGCAACCAGCA 856710 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || ||||| || || || |||||||| | | | ||||||||| | |||| Sbjct 856711 GACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGAC 856770 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911 || || || || |||| || ||||| ||| |||| || || ||| | | Sbjct 856771 CACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGT 856830 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | | || | || ||| ||| | | || || || | |||||| || || Sbjct 856831 CCTCGACAATCTT--CTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGCAAA 856888 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 ||| || | |||||||||| | ||| || ||||| || || || | |||||||| Sbjct 856889 GTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 856948 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 ||||| ||||| | ||| || || | ||||||||| || || ||||| || ||||| Sbjct 856949 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTC 857008 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 ||||| ||||| || || | || ||| | | |||| || | || ||||| || Sbjct 857009 GACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTT 857068 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207 || |||| ||||| || | ||| ||||| || || || ||||| || || || Sbjct 857069 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 857128 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 ||| || ||| |||| | || || || ||||| || || |||| |||| | Sbjct 857129 GGTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCCG 857184 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| ||||| ||| || | | || | Sbjct 857185 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGCA 857244 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || || ||||||| ||| | || || |||||||| || || ||| || || || | Sbjct 857245 CCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGA 857304 Query 17388 ACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-----CCAGTC 17442 | |||| | ||| ||||| | |||| || ||| || | | |||||| Sbjct 857305 AGGCCAGCACGTGCGAGATGAAGAACCGCTCGT-CGTTGT-TGAGCCGGTTCTCCCAGTC 857362 Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502 | || ||| | ||| | || |||| |||||| ||| |||| | ||||| || Sbjct 857363 GCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTT 857422 Query 17503 ATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| | ||| || || | ||| || |||||||| Sbjct 857423 GTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 857458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545334757880