Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 522 3e-143
seq4 141 1e-28
seq11 140 3e-28
seq8 129 6e-25
>seq3
Length=2716294
Score = 522 bits (578), Expect = 3e-143
Identities = 642/865 (74%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||||||||| ||||||| ||||||||| ||| | |||||||| || |||| ||
Sbjct 857497 GAGCCGCTGCTCAAGGAGAACCACCGCCGGTTTGTGCTCTTCCCCATCCAGTACCACGAG 857438
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||
Sbjct 857437 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTC 857378
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | ||||||||||| || | ||| || ||||||| |||||| |
Sbjct 857377 GGCAAGGACATGGGCGACTGGGAGAACCGGCTCAACAACGACGAGCGGTTCTTCATCTCG 857318
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||||||||| || || || ||| || || || |||||||| ||||| |||||
Sbjct 857317 CACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGGAGCGA 857258
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||||||||| ||||||| ||||||||||||||| |||||| |||
Sbjct 857257 TTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATG 857198
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929
|||||| | |||||||||| ||| ||| || |||||||| ||| | | | | |
Sbjct 857197 GAGAACATCCACTCGGAAACGTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAG 857138
Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
||| ||| || | | ||| |||||||||||||| || || ||| |||| ||||||||
Sbjct 857137 GAGC-GAACCTACCT--GTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCC 857081
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|| |||||||| |||||| ||| | ||| | |||| |||||||| ||| | ||
Sbjct 857080 GACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGACCTTTGGCGAGCGGCTGATAGCT 857021
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || |||||||||||| ||||||| || ||| |||||| |||| || |||||||||
Sbjct 857020 TTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAG 856961
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| || || |||||||||||||| || ||| |||||||||||||||| | |||||||||
Sbjct 856960 AAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGT 856901
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229
||||| ||||||||||||| |||| ||| ||| | | | | ||||| | | |
Sbjct 856900 CTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCTCGAGAACCGACCCTCCAAGAAG 856841
Query 117230 CGCGTC-AGG--GAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286
||| ||| | ||| || ||| || || | ||||||||| ||||| |||||
Sbjct 856840 ATTGTCGAGGACGTGATTGT---CGAGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGAC 856784
Query 117287 GCGCTG-CCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344
|| ||| || ||| ||||||| ||| | || || || | |||| || ||||| ||||
Sbjct 856783 GCCCTGCCCTGTG-GTCTGCTCGGAATGAA-CGCCAAGCTCATGTGCCAGTACATTGAGT 856726
Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404
| ||||||||| | |||||| | | || | | | ||||| ||||||| | ||||||
Sbjct 856725 TTGTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACC 856666
Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429
| | ||||| ||| | ||||||
Sbjct 856665 CCTTCGACTTCATGGAGAACATCTC 856641
>seq4
Length=2565013
Score = 141 bits (156), Expect = 1e-28
Identities = 162/215 (75%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
||||||| || || || || || || ||||| ||||||||| |||| || || | |||
Sbjct 110344 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 110285
Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||||||
Sbjct 110284 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 110226
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||||| || | ||| ||||| ||||| || |||| || || || |||||||||
Sbjct 110225 CAGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAAC 110166
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| |||| ||||| || || ||||
Sbjct 110165 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCG 110131
>seq11
Length=586936
Score = 140 bits (154), Expect = 3e-28
Identities = 159/211 (75%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || || ||||||||| |||| ||||| | |
Sbjct 305881 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 305940
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| ||||| |||||| |||||||
Sbjct 305941 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 305999
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||||| |||| ||| || || ||||| || |||| || |||||| |||||||||
Sbjct 306000 GCAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAA 306059
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| || || || |||
Sbjct 306060 CATCCAGAAGGAATCCACTCTCCACCTTGTG 306090
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| |||| || || || ||
Sbjct 305653 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 305712
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || |||| ||||| ||||| || ||| |||||||
Sbjct 305713 GATACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCA 305771
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| ||||| |||| ||| || || ||||| || |||| || || || |||||||||
Sbjct 305772 GCAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAA 305831
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | || || ||||| ||
Sbjct 305832 CATCCAGAAGGAGTCTACTCTCCATCTGGT 305861
Score = 114 bits (126), Expect = 1e-20
Identities = 124/162 (77%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 40738 GTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCAT 40796
||||| || |||||| | | | |||| ||||| || |||| ||||| ||||| ||
Sbjct 304913 GTCGAGTCCTCCGACACCATCGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGAAT 304971
Query 40797 CCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCT 40856
||| |||||||||| |||||||| | ||| || || ||||| || |||| || || ||
Sbjct 304972 TCCCCCGGACCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAGGACGGACGAACTCT 305031
Query 40857 CAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||||||||| |||| || ||||| ||
Sbjct 305032 GTCCGACTACAACATCCAGAAGGAGTCCACCCTTCATCTGGT 305073
>seq8
Length=911341
Score = 129 bits (142), Expect = 6e-25
Identities = 161/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 40688 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747
||||||| || || || || || || || || || || |||||| | || || || |
Sbjct 549689 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 549630
Query 40748 CCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | |||| ||||| || || | ||||| ||||| || ||| |||||
Sbjct 549629 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 549571
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| ||||| |||| ||| || || ||||| || |||| || ||||| ||||||
Sbjct 549570 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 549511
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||||| |||| || ||||| || ||||
Sbjct 549510 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 549473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218935950160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |