Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq4 114 8e-21
seq11 113 3e-20
seq8 95.1 8e-15
>seq4
Length=2565013
Score = 114 bits (126), Expect = 8e-21
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || ||||| | ||| || ||||| ||||||||||| ||
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| |||||||| || ||||||||||| |||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 110298
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCA 34388
|| | |||||||| ||||| || || || || |||||||| ||||
Sbjct 110299 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq11
Length=586936
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| ||||| || | |||| || ||||| ||||||||||||||||| || ||||
Sbjct 305864 AGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCC 305805
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 305804 TCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 305745
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | ||||| || || || || | ||||||||
Sbjct 305744 TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 305685
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || || || || ||||||||||||||
Sbjct 305684 TTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||| | ||| ||| ||||| |||||||||||||| || || ||||
Sbjct 306092 AGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCC 306033
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 306032 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 305973
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || ||||| || | ||||||||
Sbjct 305972 TGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTC 305913
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| || || ||||| || ||||||||
Sbjct 305912 TTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 84.2 bits (92), Expect = 1e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTC 34288
||| | || || | |||||| || ||||||||||| ||||||||||| ||| | | |
Sbjct 305253 CGGCCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCC 305194
Query 34289 TCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACC 34348
|||||||| ||||| ||| | | | | || | |||| || || || || |
Sbjct 305193 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGA 305134
Query 34349 GTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || ||||| || ||||| || ||||||||
Sbjct 305133 GTGATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Score = 82.4 bits (90), Expect = 5e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||||||| || |||| || | |||||| || ||||||
Sbjct 305055 TCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAA 304996
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
||||| ||||||||||| ||| | | |||||||||
Sbjct 304995 ATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 304958
>seq8
Length=911341
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | ||| || || || | ||| || ||||| ||||||||||| ||
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||| || ||||| || || ||||||||||| |||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | |||| || || ||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || || ||||| || || || ||||| ||||||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071838564960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |