Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 4e-18
>seq4
Length=2565013
Score = 107 bits (118), Expect = 4e-18
Identities = 655/1048 (63%), Gaps = 42/1048 (4%)
Strand=Plus/Plus
Query 248426 TCACCAAGCGGGACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCA 248485
||| |||||| ||||| ||||| || ||| | ||||||||||| | || || ||||
Sbjct 2493385 TCATCAAGCGAGACGGCCGCAAGGAGTCCGTCCAGGTCGACAAAATCACCGCTCGAATCA 2493444
Query 248486 AGAAGCTCTGTTATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAG 248545
|| || ||||| || || || ||| || ||| || | | ||| ||| ||
Sbjct 2493445 AGCGTCTGTGTTACGGCCTTGATCCCGACCACGTGGACCCCATCCAGATCACCCTCAAGA 2493504
Query 248546 TTATTTCGGGCGTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGA 248605
|| || ||| ||||| ||||| | || | || || |||| | | ||||| ||||
Sbjct 2493505 TTGCGTCTGGCATCTACGAGGGAGTGAGCACCATTGAGCTCGACAACCTGGCTGCCGAGA 2493564
Query 248606 CGGCGGCGTACATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCG 248665
| ||||| |||||| | | | ||||||||||| || | ||||| | | |||||||
Sbjct 2493565 CCGCGGCCTACATGACCACTCTGCACCCCGACTATGCGATTCTGGCTGCCCGAATCGCCG 2493624
Query 248666 TCTCAAGGCTTCACAAAGAAACGAAAGAGTCGTT------CGTCG-AAACCATGGCTGAC 248718
| || | || ||||| | || || || ||| || | || || || |
Sbjct 2493625 TGTCCAACCTGCACAAGCAGACCAAGAAGCAGTTTTCACAGGTGGTCTACGATCTCTACC 2493684
Query 248719 -CTACATG---CCT----ATGGGATG--GTCGCCGATGACGTCC-------------ACA 248755
|||| || ||| | || | ||||| ||| |||| |||
Sbjct 2493685 ACTACGTGAACCCTCGCAACAAGAAGCACTCGCCCATGGTGTCCAAGGAGCTATACGACA 2493744
Query 248756 CCGTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGG 248815
||| | |||| |||||| || || |||| || ||| ||||| | ||| ||
Sbjct 2493745 CCG---TACAGGCGAACGCGGACGAGCTCAACGGAGCCATTCTCTACGACCGAGACTTCA 2493801
Query 248816 AGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCA 248875
||| | | ||||| ||||| || |||||| | | || || || | | | |||
Sbjct 2493802 CCTACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCCTACCTGCTGCGAGTCAACGGCG 2493861
Query 248876 AGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATG 248935
| | || ||| ||||| ||| | ||||||||| ||||||| || ||| ||
Sbjct 2493862 CTGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACA 2493921
Query 248936 ACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCA 248995
|||| | | | | ||||| |||| | ||| | || | | || || ||
Sbjct 2493922 ACATTGCCCGAGCCATTGAGACCTACAACTACATGTCTCAAAAGTACTTCACCCACGCTT 2493981
Query 248996 CACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG 249055
| || || || | |||||| || ||| | | ||| || ||||| || ||| |
Sbjct 2493982 CCCCTACCCTGTACAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 2494041
Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGA 249112
|||| | |||||||| |||||||||| || ||||| || | |||| || |
Sbjct 2494042 ACATGAAGGACGACTCCATCGACGGCATCTACGACACCCTCA---AGACTTGTGCTCTCA 2494098
Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172
| || || | ||| || || |||||||| ||| || |||||||||||| | || || |
Sbjct 2494099 TCTCCAAGTCCGCTGGAGGTATCGGTCTGTCCATCCACAACATCCGAGCCACCGGATCCT 2494158
Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232
|||| || || || || | | |||||||| ||| | || || || |
Sbjct 2494159 ACATTGCCGGAACCAACGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACA 2494218
Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATT 249289
|||||| | | | || |||||| || | ||| || | || ||||||||
Sbjct 2494219 ACACCGCTCGATACGTCGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACC 2494278
Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349
|||| ||||||| || | || |||||| || || ||||||| |||| || |
Sbjct 2494279 TGGAGCCCTGGCACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGG 2494338
Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409
|| || |||| || || || ||| | || ||| | ||||| |||||||| |
Sbjct 2494339 AGGAGATTCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATTCCCGACCTGTTCATGGAGC 2494398
Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCT 249437
| ||| || ||| ||| ||||| ||
Sbjct 2494399 GAGTCGAGCAGAACGCCGAGTGGACTCT 2494426
Score = 91.5 bits (100), Expect = 3e-13
Identities = 161/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 249864 GTCCAACATGAAGCACCGTCCATGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACAT 249923
|||||||||| ||||| || || ||||| || |||| ||| || || |||
Sbjct 2494865 GTCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCAT 2494924
Query 249924 GGTGATGGGATTCCCCTTCGAGTCAGAGGAGGCAGCGACGCTAAATAAACAGATTTTCGA 249983
|| | || | ||||||||||| |||||||| || ||| || | ||||| |||||
Sbjct 2494925 GGCCCTCCGACTGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGA 2494984
Query 249984 GACCATCTATCACGGGAGCGTCGAGGCGTCCATCGAAAGGGCCAAGATCGACGGACCATA 250043
||||||||| ||||| ||| ||||| || ||| | |||| ||||| | ||
Sbjct 2494985 GACCATCTACCACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTGCTTA 2495044
Query 250044 CGAGAGTTTTCAGGGGTCGCCCGCGTCGTTCGGGAAGCTTCAGTTTGATCTTTGG 250098
||||| || ||||| || || || || || | || |||||||| || |||
Sbjct 2495045 CGAGACCTTCCAGGGCTCTCCTGCCTCCAAGGGTGACCTGCAGTTTGACCTGTGG 2495099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765835937088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |