Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 107 4e-18 >seq4 Length=2565013 Score = 107 bits (118), Expect = 4e-18 Identities = 655/1048 (63%), Gaps = 42/1048 (4%) Strand=Plus/Plus Query 248426 TCACCAAGCGGGACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCA 248485 ||| |||||| ||||| ||||| || ||| | ||||||||||| | || || |||| Sbjct 2493385 TCATCAAGCGAGACGGCCGCAAGGAGTCCGTCCAGGTCGACAAAATCACCGCTCGAATCA 2493444 Query 248486 AGAAGCTCTGTTATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAG 248545 || || ||||| || || || ||| || ||| || | | ||| ||| || Sbjct 2493445 AGCGTCTGTGTTACGGCCTTGATCCCGACCACGTGGACCCCATCCAGATCACCCTCAAGA 2493504 Query 248546 TTATTTCGGGCGTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGA 248605 || || ||| ||||| ||||| | || | || || |||| | | ||||| |||| Sbjct 2493505 TTGCGTCTGGCATCTACGAGGGAGTGAGCACCATTGAGCTCGACAACCTGGCTGCCGAGA 2493564 Query 248606 CGGCGGCGTACATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCG 248665 | ||||| |||||| | | | ||||||||||| || | ||||| | | ||||||| Sbjct 2493565 CCGCGGCCTACATGACCACTCTGCACCCCGACTATGCGATTCTGGCTGCCCGAATCGCCG 2493624 Query 248666 TCTCAAGGCTTCACAAAGAAACGAAAGAGTCGTT------CGTCG-AAACCATGGCTGAC 248718 | || | || ||||| | || || || ||| || | || || || | Sbjct 2493625 TGTCCAACCTGCACAAGCAGACCAAGAAGCAGTTTTCACAGGTGGTCTACGATCTCTACC 2493684 Query 248719 -CTACATG---CCT----ATGGGATG--GTCGCCGATGACGTCC-------------ACA 248755 |||| || ||| | || | ||||| ||| |||| ||| Sbjct 2493685 ACTACGTGAACCCTCGCAACAAGAAGCACTCGCCCATGGTGTCCAAGGAGCTATACGACA 2493744 Query 248756 CCGTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGG 248815 ||| | |||| |||||| || || |||| || ||| ||||| | ||| || Sbjct 2493745 CCG---TACAGGCGAACGCGGACGAGCTCAACGGAGCCATTCTCTACGACCGAGACTTCA 2493801 Query 248816 AGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCA 248875 ||| | | ||||| ||||| || |||||| | | || || || | | | ||| Sbjct 2493802 CCTACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCCTACCTGCTGCGAGTCAACGGCG 2493861 Query 248876 AGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATG 248935 | | || ||| ||||| ||| | ||||||||| ||||||| || ||| || Sbjct 2493862 CTGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACA 2493921 Query 248936 ACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCA 248995 |||| | | | | ||||| |||| | ||| | || | | || || || Sbjct 2493922 ACATTGCCCGAGCCATTGAGACCTACAACTACATGTCTCAAAAGTACTTCACCCACGCTT 2493981 Query 248996 CACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG 249055 | || || || | |||||| || ||| | | ||| || ||||| || ||| | Sbjct 2493982 CCCCTACCCTGTACAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 2494041 Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGA 249112 |||| | |||||||| |||||||||| || ||||| || | |||| || | Sbjct 2494042 ACATGAAGGACGACTCCATCGACGGCATCTACGACACCCTCA---AGACTTGTGCTCTCA 2494098 Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172 | || || | ||| || || |||||||| ||| || |||||||||||| | || || | Sbjct 2494099 TCTCCAAGTCCGCTGGAGGTATCGGTCTGTCCATCCACAACATCCGAGCCACCGGATCCT 2494158 Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232 |||| || || || || | | |||||||| ||| | || || || | Sbjct 2494159 ACATTGCCGGAACCAACGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACA 2494218 Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATT 249289 |||||| | | | || |||||| || | ||| || | || |||||||| Sbjct 2494219 ACACCGCTCGATACGTCGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACC 2494278 Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349 |||| ||||||| || | || |||||| || || ||||||| |||| || | Sbjct 2494279 TGGAGCCCTGGCACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGG 2494338 Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409 || || |||| || || || ||| | || ||| | ||||| |||||||| | Sbjct 2494339 AGGAGATTCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATTCCCGACCTGTTCATGGAGC 2494398 Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCT 249437 | ||| || ||| ||| ||||| || Sbjct 2494399 GAGTCGAGCAGAACGCCGAGTGGACTCT 2494426 Score = 91.5 bits (100), Expect = 3e-13 Identities = 161/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 249864 GTCCAACATGAAGCACCGTCCATGTGGGCTGGGCGTTCAGGCACTGCACGACGTCTACAT 249923 |||||||||| ||||| || || ||||| || |||| ||| || || ||| Sbjct 2494865 GTCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCAT 2494924 Query 249924 GGTGATGGGATTCCCCTTCGAGTCAGAGGAGGCAGCGACGCTAAATAAACAGATTTTCGA 249983 || | || | ||||||||||| |||||||| || ||| || | ||||| ||||| Sbjct 2494925 GGCCCTCCGACTGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGA 2494984 Query 249984 GACCATCTATCACGGGAGCGTCGAGGCGTCCATCGAAAGGGCCAAGATCGACGGACCATA 250043 ||||||||| ||||| ||| ||||| || ||| | |||| ||||| | || Sbjct 2494985 GACCATCTACCACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTGCTTA 2495044 Query 250044 CGAGAGTTTTCAGGGGTCGCCCGCGTCGTTCGGGAAGCTTCAGTTTGATCTTTGG 250098 ||||| || ||||| || || || || || | || |||||||| || ||| Sbjct 2495045 CGAGACCTTCCAGGGCTCTCCTGCCTCCAAGGGTGACCTGCAGTTTGACCTGTGG 2495099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765835937088