Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 7e-44
seq2 96.9 4e-15
>seq3
Length=2716294
Score = 192 bits (212), Expect = 7e-44
Identities = 400/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Plus
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
|| ||| || || ||| ||||||||||||||||| || | ||||| || || ||
Sbjct 856877 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGT 856936
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
||| |||||||| || || ||||| || ||||| || ||||| ||||| || ||||| ||
Sbjct 856937 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAA 856996
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTC 33754
|||||| || || || || ||||| || || || | ||| ||| | || || |||
Sbjct 856997 GAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTC 857056
Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814
|||||||| | ||||| ||||||||||| || | || || || || || |||||
Sbjct 857057 GGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116
Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874
|| || || ||| || || || || || | || || ||||||| || ||
Sbjct 857117 GTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 857176
Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934
| ||||||| || ||||| || || ||||| || |||||||| || | |||||||
Sbjct 857177 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 857236
Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994
| |||||| || | ||||| || | | || || ||||| || ||||| ||
Sbjct 857237 GACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGC 857296
Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 34050
||||| || |||| || || || || | ||||| | |||| | || |
Sbjct 857297 AGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTC-GTTGTTGAGCCGGTTCT 857355
Query 34051 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 34110
||| || || || || | ||| | || || | ||||| || || ||||| |
Sbjct 857356 CCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 857415
Query 34111 CCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
|||| || ||||| | |||||| || || || ||||| ||||| | |||||
Sbjct 857416 CCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467
>seq2
Length=3147093
Score = 96.9 bits (106), Expect = 4e-15
Identities = 429/663 (65%), Gaps = 26/663 (4%)
Strand=Plus/Minus
Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAAT 63292
||||| | ||| ||||||| | || | || ||| || || ||||| || || || || |
Sbjct 1304406 GGACAGAACAAGGACCACTTTTCGCC-TCTTTCCACCCGCTTCATGAACAGGTCCGGCAC 1304348
Query 63293 CCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63352
||| | || || || ||||||| ||| | || || ||| || || ||
Sbjct 1304347 CCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCAG 1304288
Query 63353 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63412
| ||||| | | ||||| | |||||| || |||| || ||||| | |||| ||
Sbjct 1304287 GTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGGG 1304228
Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472
|| ||||| || ||||| || | || | || ||||| || |||| || | ||| ||
Sbjct 1304227 ACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGGG 1304168
Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGAT-ATAGCCTCCACTGGCACGAATAT 63531
|| |||||| | || | || | | || | || ||||| || |||| | ||||
Sbjct 1304167 AACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCT-TGGCTCTGATAT 1304109
Query 63532 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT-CGTTTTAAC 63590
|| ||| ||||| || || || ||| |||| |||||| |||||| ||| || |
Sbjct 1304108 TATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATT--TGCGCACACGTCTTGAG 1304051
Query 63591 G-TGTCATAGATGCCTTCTATGCTATCATCGAT--CATGTTAAGTAGAAAACAGCTAGAC 63647
| | || ||||| || || ||| || ||| ||| | ||||||||| |||
Sbjct 1304050 GGTATCGTAGATTCCGTCGATGGAGTCG--GATGCCATAGCCACCAGAAAACAGGACGAC 1303993
Query 63648 ATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63707
| ||| | | ||| || ||||| || | || ||||||||||| || || |||
Sbjct 1303992 AGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTGGGAGAAGCGTGTGTGAA----TTT 1303937
Query 63708 TCAGAAAG-TAGA---TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63763
|| || | ||| ||||||| || | | | | ||||| | ||| || ||
Sbjct 1303936 TCTGAGCGACAGAGCCGTGTACGTTTCCAGCACCTTGGCGATATCGTCTCCATGGATCCC 1303877
Query 63764 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAAT--TTTGT-TGTTTATTTT 63820
| || || ||||| | ||| || ||||| | |||||| || || | | || ||
Sbjct 1303876 CAGAGCCACGCGCATGAGCATATGTTGAGGACGTTCAACTATACTTCCTCCGGTTCTT-- 1303819
Query 63821 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63880
| |||||| || ||||||| || || || ||||| || ||| || | ||||| ||
Sbjct 1303818 -AGCAAGTACGACTTTTCCAGCGTCTTGAAGCCAAAGTACGAGTAGGAGAGGTCTCTGTC 1303760
Query 63881 GTA 63883
|||
Sbjct 1303759 GTA 1303757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817277218480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |