Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3 118 1e-21 >seq3 Length=2716294 Score = 118 bits (130), Expect = 1e-21 Identities = 363/554 (66%), Gaps = 13/554 (2%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||| || || || ||||| |||| || || ||||| || || || | Sbjct 856880 ACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAG 856939 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 || ||||| | ||||| || || | ||| || || | ||||| || ||||| ||||| Sbjct 856940 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAA 856999 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGA 13838 || ||||| || || ||||| ||||| || || || ||||| | | | | || || Sbjct 857000 GATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGA 857059 Query 13839 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 ||||| || ||||| || | || || || || | || || ||||| || || Sbjct 857060 GATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTT 857119 Query 13899 GAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TA 13955 ||| | | |||| || | || ||||| ||||||| || || || | || | || Sbjct 857120 GAACAGGTAGGTTCGCTCCTTGGGGTCCTTGA--TGTATGTGTCGATCAGCA-GCGAGTA 857176 Query 13956 CATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG- 14014 | |||| ||||| ||||| || || ||||| || || || || || | || || | Sbjct 857177 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 857236 Query 14015 -ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 ||| || ||||| | | |||| || ||| ||| || || ||||||||||| | Sbjct 857237 GACC--TGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAA 857294 Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTT 14130 || ||||| || |||| | || || ||| | |||| || ||||||| | || Sbjct 857295 GCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTC 857354 Query 14131 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14190 | ||| ||| | | ||||| ||||| | || || | ||||| ||| ||| | Sbjct 857355 TCCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCG 857414 Query 14191 GCTTTTTTATACAT 14204 || || || ||||| Sbjct 857415 GCCTTCTTGTACAT 857428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588554723240