Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 309 4e-79
seq2 147 3e-30
>seq3
Length=2716294
Score = 309 bits (342), Expect = 4e-79
Identities = 597/875 (68%), Gaps = 37/875 (4%)
Strand=Plus/Minus
Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054
|| || |||||| ||| || || || ||| | |||||||| ||||| |||| || ||
Sbjct 857461 CTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTC 857402
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
||||| | ||| ||| | ||||| ||||||| || ||| ||||||| || | |
Sbjct 857401 TGGACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAAC 857342
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| ||||| || || |||||| | ||||||||||||| | |||||||| ||
Sbjct 857341 AACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATT 857282
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
|| ||||| || ||| || |||||||| ||| || | || |||| ||||
Sbjct 857281 GTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGC 857222
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
|| ||||| ||||| |||||||| |||||| | |||||||||| |||||| |||||
Sbjct 857221 TTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGATC 857162
Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGT 125353
|||| ||||| || || ||| | || | | | || ||||| ||||| || |
Sbjct 857161 GACACATACATCAAGGACCC-CAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCAT 857103
Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413
|| | || || ||||| | |||| | | ||||||| |||||| |||| |
Sbjct 857102 CCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGAC 857043
Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473
| | ||| | ||| | || || |||||||| |||||||||||||| || || ||
Sbjct 857042 CTTTGGCGAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTT 856983
Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533
|| ||||||| |||||||||||||| || ||||||||||| || || | |||||
Sbjct 856982 CGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGA 856923
Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT 125592
| | || || ||||||||||| || ||| ||||||||| ||| || || ||||| ||
Sbjct 856922 GCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCT 856863
Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAAC---ATTGTAACCGATG 125649
|||| | || || | | | | ||| || ||||| ||| |
Sbjct 856862 ----------CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTGATTGT---CGAGG 856816
Query 125650 CCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACC----GGTCAGCATGATTGGC 125705
|||| | || || || ||||| || ||||| |||| || |||| || | ||
Sbjct 856815 CCGTTGGTATCGAGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTC----TGCTCGGA 856760
Query 125706 ATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765
|||||| |||||| |||||| ||||||| |||||||| || || ||||| ||| |
Sbjct 856759 ATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTG-----G 856705
Query 125766 TTGAT-TGG----CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCA 125820
||| | | | | |||| | |||||| ||| || ||||| || |||||| | ||
Sbjct 856704 TTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACA 856645
Query 125821 TATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
| || || | || ||||||||||| |||||||||
Sbjct 856644 TCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAG 856610
>seq2
Length=3147093
Score = 147 bits (162), Expect = 3e-30
Identities = 379/567 (67%), Gaps = 8/567 (1%)
Strand=Plus/Plus
Query 96820 CCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAG 96878
||||||| | || || |||||||| | | ||| || || | || || || |||
Sbjct 1304154 CCAGTGGTATTGTTCCCATGCTCAGGGTTTTCAACAACACTG-CGCGGTATGTCGACCAG 1304212
Query 96879 GGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTT 96938
|| || || || || || || || | ||| |||| |||| || ||||| ||||| |
Sbjct 1304213 GGTGGGAACAAGCGTCCCGGAGCGTTTGCCATCTATCTGGAGCCCTGGCATGCGGATATA 1304272
Query 96939 TTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTG 96998
|| || || | | |||| |||||| || |||||| |||| || ||| ||
Sbjct 1304273 TTCGATTTCCTGAACCTGCGGAAAAACCACGGAGCGGAAGAGAACAGAGCAAGAGACCTG 1304332
Query 96999 TTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AACGACGGTGGCTACTG 97057
|| || ||| | |||||||| || ||||||||||||| || || || || | | ||
Sbjct 1304333 TTCTACGCATTGTGGGTGCCGGACCTGTTCATGAAGCGGGTGGAAAGA-GGCGAAAAGTG 1304391
Query 97058 GAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGA 97117
| | | | || || | | | || || ||| || ||||| | || |||||
Sbjct 1304392 GTCCTTGTTCTGTCCAAAGAGGGCCCCTGGGCTGGAAGACGTGTGGGGAGCGGACTTTGA 1304451
Query 97118 GGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAG-TCGATGCACGAG 97176
| |||||| || |||||| || ||||| | | | | || || | || | |
Sbjct 1304452 GCAAAAGTACGAGGAGTACGAGAAAAAGGGCTTGTTCAAC-GCCCAGATCAACGCGCAGG 1304510
Query 97177 AACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACA 97236
| |||| ||||| ||| | ||| |||| | || || ||| |||| ||| |||||||
Sbjct 1304511 AGCTGTTCAAGGCGATCCTCACGAGTCAGATCGAAACCGGAGGACCGTTCATGCTCTACA 1304570
Query 97237 AGGATACCGTGAATCG-CAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAAT 97295
|||| | | || | || ||| |||||| | || |||||||||||||| ||||||
Sbjct 1304571 AGGACAGC-TGCAACGCCAAATCCAACCAGCAGAACCTGGGCACCATCAAGTCGTCCAAT 1304629
Query 97296 CTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCA 97355
|||||||||||||| || ||||| | || || || ||| |||||| ||| | ||||
Sbjct 1304630 CTGTGCACGGAAATCGTCCAGTACTCGTCGCCCGAAGAGGTGGCAGTGTGCAATTTGGCG 1304689
Query 97356 TCGGTCAATCTGCCCAAGTTTGTAGAG 97382
|| || | ||||| ||||||| |||
Sbjct 1304690 TCTGTAGCTTTGCCCGAGTTTGTCGAG 1304716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058820207160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |