Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 1e-24
seq2 86.0 4e-12
>seq6
Length=1972418
Score = 127 bits (140), Expect = 1e-24
Identities = 330/499 (66%), Gaps = 28/499 (6%)
Strand=Plus/Minus
Query 25421 CTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTC 25480
|||||| | || ||||||||| ||| ||||||||||| |||| || || | | |||
Sbjct 1597478 CTTCAGAGCGTCCACGTGATCCTTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTC 1597419
Query 25481 TCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGAT 25540
||| || || |||| || | || ||||| || | ||| ||| ||| ||
Sbjct 1597418 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 1597359
Query 25541 GTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 25600
||| ||||| || || | |||| || | |||| |||||| ||||||||||| |||
Sbjct 1597358 GTTGAAGGGAACACCCAGACCCAGATCACAT-GACCGCTGGTACAGCTGACACGACAGC- 1597301
Query 25601 CTTCGTCGCTCA----------------CGTAAAACTGACACATGGTGTAGCACGGAGGA 25644
| || ||||||| |||| ||||| || | ||| ||| ||||||
Sbjct 1597300 CGTCCTCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGA 1597241
Query 25645 AGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCT 25704
||||| || | || ||| ||||||||||| ||| ||||| | | ||| |
Sbjct 1597240 AGAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGA 1597181
Query 25705 GGGTTGTCCCTGATA----AGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGA 25760
|||||| ||| | |||| | ||||| ||||||||||| ||| || |
Sbjct 1597180 GGGTTGGTTTTGAGAGTGTGGATCACC--TGTTT--GAGCTGATCCACACCCTGGCCAGT 1597125
Query 25761 GTAGTCTGCCCTCA-TGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACA 25819
||| |||| ||| ||| |||| || ||||| |||| | ||| ||||| || || |
Sbjct 1597124 GTAATCTG-TGTCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATA 1597066
Query 25820 CCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGG 25879
| ||||| |||||||| || || || | || || ||| |||| ||| || |||
Sbjct 1597065 CAGGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGG 1597006
Query 25880 AACCATTGGCGTCCCAGAT 25898
| ||||| ||||||| ||
Sbjct 1597005 ATCCATTTCCGTCCCAAAT 1596987
>seq2
Length=3147093
Score = 86.0 bits (94), Expect = 4e-12
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 44367 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 44426
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| |||
Sbjct 2760002 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 2759943
Query 44427 -TCACGGCGCAAAAGGGGACA--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCG 44483
|||||| || ||||| || || | | | | | ||| | ||||| ||||| |||
Sbjct 2759942 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGATATGCCATTCT 2759886
Query 44484 ACAAAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGA 44543
| || | |||||||| |||||||||||||||||||| ||||||| | ||||
Sbjct 2759885 CAGCCGAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTATGA 2759826
Query 44544 CCGT 44547
||||
Sbjct 2759825 CCGT 2759822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137430037493
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |