Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 5e-29
seq6 120 5e-23
>seq4
Length=2565013
Score = 140 bits (154), Expect = 5e-29
Identities = 194/269 (72%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| | | ||||||||||| || || ||||||||||| ||||
Sbjct 1878442 CGCTAAGCGACACCGAAAGATTT-TGCGAGATAACATTCAGGGTATCACCAAGCCCGCTA 1878384
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || ||||| || ||||| | || | | |||| || ||||
Sbjct 1878383 TCCGACGTCTTGCACGACGAGGTGGTGTGAAGCGAATTTCCGCCCAGATCTACGAGGAGA 1878324
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| ||||||| || | || || | ||||| | ||| || |
Sbjct 1878323 CCCGAAACGTTCTCAAGTCCTTCCTCGAGTCTGTCATTCGAGATGCCGTGACCTACACTG 1878264
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||||||||| || | ||| ||||||| || | || || || |
Sbjct 1878263 AGCACGCCAAGCGAAAGACTGTCACTTCTCTCGATGTCGTCTACGCCCTCAAGCGACAGG 1878204
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | |||| ||||| || |||||
Sbjct 1878203 GCCGAACCCTTTACGGTTTCGGTGGTTAA 1878175
>seq6
Length=1972418
Score = 120 bits (132), Expect = 5e-23
Identities = 190/270 (70%), Gaps = 2/270 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||||||||| || || | ||| ||||||||||||||| || || ||||| ||||| || |
Sbjct 1664791 CGCTAAGCGACACCGAAAGAT-TCTTCGAGATAACATTCAGGGTATCACTAAGCCCGCCA 1664849
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || || || || || ||||| | || | | |||| || ||||
Sbjct 1664850 TCCGACGTCTTGCGCGACGAGGAGGTGTGAAGCGAATTTCCGCCCAGATCTACGAGGAGA 1664909
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| ||||| || |||| |||| || || | ||| ||||
Sbjct 1664910 CCCGAAACGTGCTCAAGTCGTTCCTGGAGTCCGTCATCCGAGACGCCGTGACCTACACCG 1664969
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || || ||||| ||||| || |||| | ||||| || | || || || |
Sbjct 1664970 AGCACGCGAAGCGAAAGACGGTCACTTCTCTGGACGTTGTCTACGCTCTCAAGCGACAGG 1665029
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|| | | | || ||||| ||| ||||||
Sbjct 1665030 GCAGAACCCTCTACGGTTTCGGAGGTTAAT 1665059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075162513413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |