Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 192 7e-44 seq2 93.3 5e-14 >seq3 Length=2716294 Score = 192 bits (212), Expect = 7e-44 Identities = 400/592 (68%), Gaps = 8/592 (1%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || ||| || || ||| ||||||||||||||||| || || |||||||| || || Sbjct 856877 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGT 856936 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||||||| || || ||||| || ||||| || ||||| ||||| || || || || Sbjct 856937 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAA 856996 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTC 33476 |||||| || || || || ||||| || || || | ||| ||| | || || ||| Sbjct 856997 GAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTC 857056 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 |||||||| | ||||| ||||||||||| || | || || || || || ||||| Sbjct 857057 GGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 || || || ||| || || || || || | || || ||||||| || || Sbjct 857117 GTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 857176 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 | ||||||| || ||||| || || ||||| || |||||||| || | ||||||| Sbjct 857177 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 857236 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 | ||| || || | ||||| ||| ||| || || ||||| || || || || Sbjct 857237 GACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGC 857296 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 33772 ||||| || |||| || || || || | ||||| | |||| | || | Sbjct 857297 AGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTC-GTTGTTGAGCCGGTTCT 857355 Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832 ||| || || || || | ||| | || || | ||||| || || ||||| | Sbjct 857356 CCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 857415 Query 33833 CCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||| || ||||| | |||||| || | || ||||| ||||| | ||||| Sbjct 857416 CCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467 >seq2 Length=3147093 Score = 93.3 bits (102), Expect = 5e-14 Identities = 428/663 (65%), Gaps = 26/663 (4%) Strand=Plus/Minus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAAT 63241 ||||| | ||| ||||||| | || | || ||| || || ||||| || || || || | Sbjct 1304406 GGACAGAACAAGGACCACTTTTCGCC-TCTTTCCACCCGCTTCATGAACAGGTCCGGCAC 1304348 Query 63242 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63301 ||| | || || || ||||| | ||| | || || ||| || || || Sbjct 1304347 CCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCAG 1304288 Query 63302 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63361 | ||||| | | ||||| | |||||| || |||| || ||||| | |||| || Sbjct 1304287 GTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGGG 1304228 Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421 || ||||| || ||||| || | || | || ||||| || |||| || | ||| || Sbjct 1304227 ACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGGG 1304168 Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGAT-ATAGCTTCCACTGGCACGAATAT 63480 || |||||| | || | || | | || | || ||||| || |||| | |||| Sbjct 1304167 AACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCT-TGGCTCTGATAT 1304109 Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT-CGTTTTAAC 63539 || ||| ||||| || || || ||| |||| |||||| |||||| ||| || | Sbjct 1304108 TATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATT--TGCGCACACGTCTTGAG 1304051 Query 63540 G-TGTCATAGATACCCTCTATGCTATCATCGAT--CATGTTAAGTAGAAAACAGCTAGAC 63596 | | || ||||| || || ||| || ||| ||| | ||||||||| ||| Sbjct 1304050 GGTATCGTAGATTCCGTCGATGGAGTCG--GATGCCATAGCCACCAGAAAACAGGACGAC 1303993 Query 63597 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656 | ||| | ||| || ||||| || | || ||||||||||| || || ||| Sbjct 1303992 AGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTGGGAGAAGCGTGTGTGAA----TTT 1303937 Query 63657 TCAGAAAG-TAGA---TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63712 || || | ||| ||||||| || | | | | ||||| | ||| || || Sbjct 1303936 TCTGAGCGACAGAGCCGTGTACGTTTCCAGCACCTTGGCGATATCGTCTCCATGGATCCC 1303877 Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT-CTTGTT--GTTTATTTT 63769 | || || ||||| | ||| || ||||| | |||||| || ||| | | || || Sbjct 1303876 CAGAGCCACGCGCATGAGCATATGTTGAGGACGTTCAACTATACTTCCTCCGGTTCTT-- 1303819 Query 63770 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63829 | |||||| || ||||||| || || || ||||| || ||| || | ||||| || Sbjct 1303818 -AGCAAGTACGACTTTTCCAGCGTCTTGAAGCCAAAGTACGAGTAGGAGAGGTCTCTGTC 1303760 Query 63830 GTA 63832 ||| Sbjct 1303759 GTA 1303757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946880739560