Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 7e-44
seq2 93.3 5e-14
>seq3
Length=2716294
Score = 192 bits (212), Expect = 7e-44
Identities = 400/592 (68%), Gaps = 8/592 (1%)
Strand=Plus/Plus
Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359
|| ||| || || ||| ||||||||||||||||| || || |||||||| || ||
Sbjct 856877 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGT 856936
Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419
||| |||||||| || || ||||| || ||||| || ||||| ||||| || || || ||
Sbjct 856937 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAA 856996
Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTC 33476
|||||| || || || || ||||| || || || | ||| ||| | || || |||
Sbjct 856997 GAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTC 857056
Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536
|||||||| | ||||| ||||||||||| || | || || || || || |||||
Sbjct 857057 GGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116
Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596
|| || || ||| || || || || || | || || ||||||| || ||
Sbjct 857117 GTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 857176
Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656
| ||||||| || ||||| || || ||||| || |||||||| || | |||||||
Sbjct 857177 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 857236
Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716
| ||| || || | ||||| ||| ||| || || ||||| || || || ||
Sbjct 857237 GACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGC 857296
Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 33772
||||| || |||| || || || || | ||||| | |||| | || |
Sbjct 857297 AGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTC-GTTGTTGAGCCGGTTCT 857355
Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832
||| || || || || | ||| | || || | ||||| || || ||||| |
Sbjct 857356 CCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 857415
Query 33833 CCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884
|||| || ||||| | |||||| || | || ||||| ||||| | |||||
Sbjct 857416 CCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467
>seq2
Length=3147093
Score = 93.3 bits (102), Expect = 5e-14
Identities = 428/663 (65%), Gaps = 26/663 (4%)
Strand=Plus/Minus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAAT 63241
||||| | ||| ||||||| | || | || ||| || || ||||| || || || || |
Sbjct 1304406 GGACAGAACAAGGACCACTTTTCGCC-TCTTTCCACCCGCTTCATGAACAGGTCCGGCAC 1304348
Query 63242 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 63301
||| | || || || ||||| | ||| | || || ||| || || ||
Sbjct 1304347 CCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTTCCGCAG 1304288
Query 63302 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63361
| ||||| | | ||||| | |||||| || |||| || ||||| | |||| ||
Sbjct 1304287 GTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGGG 1304228
Query 63362 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63421
|| ||||| || ||||| || | || | || ||||| || |||| || | ||| ||
Sbjct 1304227 ACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAGCATGGG 1304168
Query 63422 AATAATACCGTTTGATATACCATTGGTACCGGAGAT-ATAGCTTCCACTGGCACGAATAT 63480
|| |||||| | || | || | | || | || ||||| || |||| | ||||
Sbjct 1304167 AACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCT-TGGCTCTGATAT 1304109
Query 63481 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT-CGTTTTAAC 63539
|| ||| ||||| || || || ||| |||| |||||| |||||| ||| || |
Sbjct 1304108 TATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATT--TGCGCACACGTCTTGAG 1304051
Query 63540 G-TGTCATAGATACCCTCTATGCTATCATCGAT--CATGTTAAGTAGAAAACAGCTAGAC 63596
| | || ||||| || || ||| || ||| ||| | ||||||||| |||
Sbjct 1304050 GGTATCGTAGATTCCGTCGATGGAGTCG--GATGCCATAGCCACCAGAAAACAGGACGAC 1303993
Query 63597 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656
| ||| | ||| || ||||| || | || ||||||||||| || || |||
Sbjct 1303992 AGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTGGGAGAAGCGTGTGTGAA----TTT 1303937
Query 63657 TCAGAAAG-TAGA---TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCC 63712
|| || | ||| ||||||| || | | | | ||||| | ||| || ||
Sbjct 1303936 TCTGAGCGACAGAGCCGTGTACGTTTCCAGCACCTTGGCGATATCGTCTCCATGGATCCC 1303877
Query 63713 TACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT-CTTGTT--GTTTATTTT 63769
| || || ||||| | ||| || ||||| | |||||| || ||| | | || ||
Sbjct 1303876 CAGAGCCACGCGCATGAGCATATGTTGAGGACGTTCAACTATACTTCCTCCGGTTCTT-- 1303819
Query 63770 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 63829
| |||||| || ||||||| || || || ||||| || ||| || | ||||| ||
Sbjct 1303818 -AGCAAGTACGACTTTTCCAGCGTCTTGAAGCCAAAGTACGAGTAGGAGAGGTCTCTGTC 1303760
Query 63830 GTA 63832
|||
Sbjct 1303759 GTA 1303757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946880739560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |