Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 251 2e-61 seq2 123 6e-23 >seq4 Length=2565013 Score = 251 bits (278), Expect = 2e-61 Identities = 621/927 (67%), Gaps = 14/927 (2%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| | ||||||| || |||| || | | ||| || || || ||| Sbjct 2493822 AAGACCCTGGAGCGAGCCTACCTGCTGCGAGTCAACGGCGCTGTTGCCGAGCGACCCCAG 2493881 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | |||||||| || | ||| || ||||| Sbjct 2493882 CAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAACATTGCCCGAGCCATTGAG 2493941 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || || | | || ||| ||| ||||| ||||| | || || ||||||| Sbjct 2493942 ACCTACAA-CTAC-ATGT-CTCAAAAGTACTTCACCCACGCTTCCCCTACCCTGTACAAC 2493998 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || ||||| | | || |||||||| || || || ||| | || ||||||||||| ||| Sbjct 2493999 GCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 2494058 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||| || |||| ||||| || |||| ||||||||| || |||||| || || || Sbjct 2494059 ATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGGAGGT 2494118 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCGCGGCACAGGGGG 363755 || ||| | || |||||||| | || | ||| | | |||||| ||| || || Sbjct 2494119 ATCGGTCTGTCCATCCACAACATCCGAGCCACCGGA-TCCTACATTGCCGGAACCAACGG 2494177 Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815 ||| || || | || |||||||| ||||| | |||| || || | |||||||| Sbjct 2494178 TACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGTCGA 2494237 Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875 |||||| || ||||| || || ||||| ||||| || ||||| || | || Sbjct 2494238 CCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGATGA 2494297 Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935 | || ||||| ||||| || || ||| || || ||||| | || || || || Sbjct 2494298 CGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAGCCCGAGA 2494357 Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG-- 363993 ||||||| || || ||| || | |||| || ||| |||| || || ||| | | | Sbjct 2494358 TCTGTTCCTGGCTCTCTGGATTCCCGACCTGTTCATGGAGCGAGTCGA-GCA-GAACGCC 2494415 Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053 | ||| | ||| | ||||| |||| || || || || || || | |||||||| Sbjct 2494416 GAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTCGATGACGTCTACGGTGACGAG 2494475 Query 364054 TATGTTGC-TCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC 364112 | | || || ||||| |||| || |||||| | ||| || || || || Sbjct 2494476 T-TCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGACGAACCATCCCTGC 2494534 Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172 |||||||| |||| ||| |||| | |||| ||| | || | |||| ||| | Sbjct 2494535 CCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGAGTCCGGTAACCCCTTCATGCT 2494594 Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232 ||||| || | |||||||| |||||||||||| || |||| ||||| || || Sbjct 2494595 CTACAAGGACGCCTGCAACCGAAAGTCCAACCAGAAGAACCTGGGTACCATCAAGTCTTC 2494654 Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292 |||||| ||| ||||||| | || ||| | |||| || ||| || || || ||||| Sbjct 2494655 CAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAACCT 2494714 Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGT 364319 || || ||||| || || | ||||| Sbjct 2494715 GGCTTCCATCGCTCTGCCCACCTTTGT 2494741 Score = 118 bits (130), Expect = 3e-21 Identities = 277/413 (67%), Gaps = 10/413 (2%) Strand=Plus/Plus Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || ||||| ||| | ||||| ||||| ||||||||||||||| || Sbjct 2495184 GCCCCCATGCCTACCGCTTCCACTTCTCAGATTCTCGGCTTCAACGAGTGCTTCGAGCCC 2495243 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | || ||| |||| || || || || ||| | || || || | | | || || Sbjct 2495244 TACACCTCCAACATTTACTCTCGACGAGTGCTTGCTGGTGAGTTCCAGATTGTCAACCCC 2495303 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929 | || ||||||| || || || |||||| || | |||||||||| ||| Sbjct 2495304 TGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAACGAGACCATGAAGAACCGAATC 2495363 Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACAT-TCCAGGAT-TTCCAGAAGATCTGAAGCCTA 364987 | |||| || || || ||||||||||| ||| || |||| ||||| ||| Sbjct 2495364 GTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC--AAGGACC 2495421 Query 364988 TTTACAAAACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGCGGCCGATC 365044 | ||||| ||||| ||||| ||||| | ||||| |||| || ||||| ||||| | Sbjct 2495422 TGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGAA---TCATCGAGATGGCTGCCGACC 2495478 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 | | || || ||| |||||| | ||| | ||| | | || ||| | Sbjct 2495479 GATCCCCCTTCATTGACCAGTCCCAGTCCCTCAACATCCACATCAAGGACCCCACCATGG 2495538 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 |||||| || |||||||| |||||||| ||||| ||||| ||||| ||| Sbjct 2495539 GCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGGT 2495591 >seq2 Length=3147093 Score = 123 bits (136), Expect = 6e-23 Identities = 379/580 (65%), Gaps = 12/580 (2%) Strand=Plus/Plus Query 363441 TATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGA 363500 ||| |||||||| || || |||||| | ||||| || ||| | || |||||| | || Sbjct 1303834 TATAGTTGAACGTCCTCAACATATGCTCATGCGCGTGGCTCTGGGGATCCATGGAGACGA 1303893 Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTC-GTGTATTCACGCACGCC 363558 | | | | | | ||||| || | | ||| || |||| | |||||| ||||| Sbjct 1303894 TATCGCCAAGGTGCTGGAAACGTACACGGCTCT--GTCGCTCAGAAAATTCACACACGCT 1303951 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 | || || | | |||||| || |||| | ||| |||| || || ||||| | Sbjct 1303952 TCTCCCACGCTTTTCAATGCCGGTACTCCCCAGGGACAACTGTCGTCCTGTTTTCTGGTG 1304011 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678 ||| ||| |||||||| || |||| || || || |||| ||||| | || Sbjct 1304012 GCTATGGCATCCGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATC 1304071 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTAC 363738 || || | || || || || ||| | || || ||| | | || || | | Sbjct 1304072 TCGAAAACGGCTGGAGGTATCGGTCTGCATATTCATAATATCAGAGCCAAGGGTGCTATC 1304131 Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 ||| || | |||| || | ||| | ||||||||||| | || || |||| Sbjct 1304132 ATTACTGGGTCTCAGGGAAGGTCCAGTGGTATTGTTCCCATGCTCAGGGTTTTCAACAAC 1304191 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 |||||| |||| |||||||||||||| ||||| || |||||||| || ||||| Sbjct 1304192 ACTGCGCGGTATGTCGACCAGGGTGGGAACAAGCGTCCCGGAGCGTTTGCCATCTATCTG 1304251 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGA 363917 ||||| ||||| ||||| || || || || | || |||||||| ||||| || Sbjct 1304252 GAGCCCTGGCATGCGGATATATTCGATTTCCTGAACCTGCGGAAAAACCACGG----AGC 1304307 Query 363918 GGAATTG---CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 |||| | | ||| | || |||||||| ||| | ||||| | |||| || ||||| Sbjct 1304308 GGAAGAGAACAGAGCAAGAGACCTGTTCTACGCATTGTGGGTGCCGGACCTGTTCATGAA 1304367 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCA 364014 ||| ||||| ||| | || ||||| | || || ||| Sbjct 1304368 GCGGGTGGAAAGAGGCGAAAAGTGGTCCTTGTTCTGTCCA 1304407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352915332062