Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 150 2e-31
seq11 127 2e-24
seq8 116 3e-21
seq2 98.7 9e-16
seq4 89.7 5e-13
seq1 89.7 5e-13
>seq3
Length=2716294
Score = 150 bits (166), Expect = 2e-31
Identities = 340/501 (68%), Gaps = 29/501 (6%)
Strand=Plus/Minus
Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158
||||| ||||||||||| | ||||||||| | | | |||| || | ||||||
Sbjct 857089 AAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGACCTTTGGCGAGCGG 857030
Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218
|| | || ||||| || |||||| |||| || || ||| || ||| |||||||
Sbjct 857029 CTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTC 856970
Query 46219 TACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277
| |||| || | ||| | ||||||||||||| || || ||||||||| || || ||
Sbjct 856969 TGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 856911
Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACA-CTCGCGTGCACGAC 46335
|||||||| ||||| || |||||||| ||||| || | | || |||| | | ||||
Sbjct 856910 AGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCTCGAGAAC-CGAC 856852
Query 46336 --------AAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTG 46387
||| ||| ||| |||| | ||| ||||| || | || |
Sbjct 856851 CCTCCAAGAAGATTG---TCGAGGACGTGAT-----TGT----CGAGGCCGTTGGTATCG 856804
Query 46388 AGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAA 46447
|| ||||||| | || | ||| |||||| || ||||| || |||||||| || |
Sbjct 856803 AGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCAAGCTCA 856744
Query 46448 TGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAA 46505
||||| | ||||| |||||||| || ||||| ||||| || ||| || || | | ||
Sbjct 856743 TGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGT--TGCTCTCGGCAACTCCAA 856686
Query 46506 GCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAAC 46565
| | || | ||| || || || || ||| | |||||||| |||| ||||| ||
Sbjct 856685 GGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGAC 856626
Query 46566 TAATTTTTTCGAAAAGCGCGT 46586
|| || ||||| ||||| ||
Sbjct 856625 CAACTTCTTCGAGAAGCGGGT 856605
>seq11
Length=586936
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || ||||| | || | || || ||||| || |||||||| |||
Sbjct 306108 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 306049
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 306048 GAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 305989
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | ||| || | |||||||
Sbjct 305988 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGAC 305929
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| || || || ||||||||||||||
Sbjct 305928 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || |||||||| || |||||||| ||| |
Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||||||| |||||| |
Sbjct 305759 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 305700
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || || || || || || ||||||||
Sbjct 305699 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 91.5 bits (100), Expect = 1e-13
Identities = 127/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | ||| |||||||| || |||||||| ||| |
Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| | || | |||||||||||||| ||
Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||||| || ||||| || || ||||| | || | || |||| ||||||||
Sbjct 304971 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGA 304914
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| |||||||| || ||| | || | |||||||||||||| || || || || |||
Sbjct 305247 TCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTG 305188
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | ||| |||| |||||| | |||| || | |
Sbjct 305187 TCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTGATG 305128
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || || || || ||||||||||||||
Sbjct 305127 GTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
>seq8
Length=911341
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | ||| | || |||||||| || |||||||| ||
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || |||||||| || || || || |||||||||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
>seq2
Length=3147093
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/156 (75%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 145631 GACGCCAAATTACAAACTGCCGTCTCCTCGG-CGTCGCTGTATTGTACGATCTCGGCGCA 145689
||||||||||| || |||||| ||| |||| || || ||| || ||||| || | |||
Sbjct 1304691 GACGCCAAATTGCACACTGCCACCTCTTCGGGCGACGA-GTACTGGACGATTTCCGTGCA 1304633
Query 145690 CAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTC 145749
|| |||| | |||||||| ||||| || ||||| || ||| |||||| |||
Sbjct 1304632 CAGATTGGACGACTTGATGGTGCCCAGGTTCTGCTGGTTGGATTTGGCGTTGCAGCTGTC 1304573
Query 145750 CTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTG 145785
||||||||||||| ||||||| || || || | |||
Sbjct 1304572 CTTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTG 1304537
>seq4
Length=2565013
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||| || | || | || |||||||| || |||||||| || | || || |
Sbjct 110131 CGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCG 110190
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| | || | |||||||||||||| || || || || |||
Sbjct 110191 TCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 110250
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | || |||| ||||| | |||| ||| | |
Sbjct 110251 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATG 110310
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233
|| || || || || || || || || || ||||
Sbjct 110311 GTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq1
Length=3339266
Score = 89.7 bits (98), Expect = 5e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869
||| ||||| || || ||||||||||||| | | |||| || ||||||| || |
Sbjct 1310385 GTTTCCGAGGTCACCAACGTGTCGCTCGGAGTCGGTGGGGGCACCGTGGTTCTTCTTGAA 1310326
Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929
||| || ||||| |||||| || ||||| |||||| || |||| || |||||||| ||
Sbjct 1310325 GGGGTTGAAGTGGGGGCCGGCAGAAGTGCAGCCGTTGGTGTTGTCACCAAACTCGTGGAC 1310266
Query 51930 GTGAAAGCC 51938
||| || ||
Sbjct 1310265 GTGGAATCC 1310257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012558093440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |