Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq8 111 1e-19
seq11 107 2e-18
seq4 105 5e-18
seq1 84.2 2e-11
>seq8
Length=911341
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | ||| || | ||| || ||||||||||| || ||||||||||| |
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| | ||||||| | || || || || | ||||| ||||| |||||| ||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| || | ||| || | | | | |||||| | ||||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTT 16937
|| | |||||| || || ||||| || || |||||||||||||||||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
>seq11
Length=586936
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || |||| ||| || || |||||||| || ||||||||||||| |
Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| ||||||| | || || || || | ||||| ||||| |||||| ||
Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| ||| | ||| || | | | | || ||| || |||
Sbjct 305759 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 305700
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| ||||| ||||| || |||||||| ||||||||
Sbjct 305699 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | || || | || || ||||| ||||| || |||||||||||||
Sbjct 306107 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 306048
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| ||||||| | || || || || | ||||| ||||| |||||| ||
Sbjct 306047 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 305988
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| ||||| ||||| || | ||| || | | | | |||||| | |||
Sbjct 305987 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACC 305928
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||||||| |||||||| || || || || |||||||||||
Sbjct 305927 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881
>seq4
Length=2565013
Score = 105 bits (116), Expect = 5e-18
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | ||| || | ||||| ||||||||||| || ||||||||||| |
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | ||||||| | || ||||| || |||| || ||||| |||||| ||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| || | ||| || | | | | |||||| | ||||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 110298
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCA 16934
|| | ||||||||| || || || || || |||||||| || ||||
Sbjct 110299 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq1
Length=3339266
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 19401 GGTTTTCATGTGCACGAGTTTGGTGATACCAGCAACGGGTGCACGTCAGCAGGCGAGCAT 19460
|| || || || |||||||||||||| | || |||||| ||||| || || ||| ||
Sbjct 1310257 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCCGGCCCCCAC 1310316
Query 19461 TTTAACCCCACGCATCAACAGCATGGTGCCCCCGACGCCGCAGAGCGGCACGTTGGTGAC 19520
|| |||||| | | | || ||||||||| || | | ||||| ||||||||||||
Sbjct 1310317 TTCAACCCCTTCAAGAAGAACCACGGTGCCCCCACCGACTCCGAGCGACACGTTGGTGAC 1310376
Query 19521 CTGGGCAACGT 19531
|| || |||||
Sbjct 1310377 CTCGGAAACGT 1310387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087797582590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |