Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 159 4e-34 >seq3 Length=2716294 Score = 159 bits (176), Expect = 4e-34 Identities = 393/592 (66%), Gaps = 8/592 (1%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 || ||| || || ||| ||| ||||||||||||| || | |||||||| || || Sbjct 856877 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGT 856936 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||| |||||||| || || ||||| || ||||| || ||||| || || || || || || Sbjct 856937 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAA 856996 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCG--GCGCTGTC 32833 ||| || || || || || ||||| || || || | ||| ||| | || || ||| Sbjct 856997 GAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTC 857056 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 |||||||| | ||||| ||||||||||| || | || || || ||||| || || Sbjct 857057 GGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 || || || ||| || || || || || | ||||| || |||| || || Sbjct 857117 GTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 857176 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 | ||||||| || ||||| || || || || || ||||||||||| | ||||||| Sbjct 857177 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 857236 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 | ||| || || | ||||| || | | || || ||||| || || || || Sbjct 857237 GACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGC 857296 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTAT 33129 ||||| || |||| || || || || | ||||| | |||| | || | Sbjct 857297 AGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTC-GTTGTTGAGCCGGTTCT 857355 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 ||| || || || || | ||| | || || | ||||| || || ||||| | Sbjct 857356 CCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGG 857415 Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||| || ||||| | |||||| || || || || || || || | ||||| Sbjct 857416 CCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 857467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631675263600