Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 199 4e-46 >seq3 Length=2716294 Score = 199 bits (220), Expect = 4e-46 Identities = 522/789 (66%), Gaps = 17/789 (2%) Strand=Plus/Plus Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986 || || ||||| || |||||||| |||| | | |||||||| || |||| ||| Sbjct 856716 TCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACC-ACA 856774 Query 92987 GGT-AGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045 || || |||||||||| ||| || | |||||| ||||||| || ||| || Sbjct 856775 GGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGA-CAA----TCACG 856829 Query 93046 TACTCTACTAT----TTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAA 93099 | ||| || || |||| || | || | ||| | | | | | || ||||| Sbjct 856830 TCCTCGACAATCTTCTTGGAGGGTCGGTTCT-CGAGGTGCGAGAAGAGCAGACAGGCAAA 856888 Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159 |||||| || | ||| |||||||| || || | ||| ||| ||| || | || || | Sbjct 856889 GTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 856948 Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219 || ||||| ||||||||||| || || || || || || || || || || || || Sbjct 856949 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTC 857008 Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTT 93279 ||||| ||||| || | | || ||| |||| | | | | |||||| || Sbjct 857009 GACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTT 857068 Query 93280 TAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTA 93339 | ||||| ||||| || ||||| || || || | || ||||| ||||| || ||||| Sbjct 857069 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 857128 Query 93340 ATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATG 93399 |||||| | | || |||||||| ||||| | ||| || ||| |||| || || Sbjct 857129 GGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCCGAGTG 857188 Query 93400 GACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC 93459 || |||||||| || ||||| |||||||| || | || || | || |||||| || Sbjct 857189 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGCACCTC 857248 Query 93460 TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGC 93519 || |||| ||| || || || || || || ||||||||||| || ||||| || || Sbjct 857249 GCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGAAGGC 857308 Query 93520 CAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAG 93576 || | ||| || || ||| || | || ||| || ||||| ||| | Sbjct 857309 CAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCGCCCAT 857368 Query 93577 ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACAT 93636 || || ||||| | || ||| | ||||| || || || || || || |||||||| Sbjct 857369 GTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 857428 Query 93637 ATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 | ||| || || || || || || || || | ||||| || |||| || || || Sbjct 857429 CTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGGCGGTGGTTCTCCTTGAG 857488 Query 93697 TAACGGCTC 93705 | |||||| Sbjct 857489 CAGCGGCTC 857497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860514608840