Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 2e-24
seq4 104 2e-17
seq11 100 2e-16
>seq8
Length=911341
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||| || || | |||||||| || |||| ||||| ||||| | ||
Sbjct 549687 ATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCC 549628
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||||||||| ||||| || || ||
Sbjct 549627 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 549568
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || ||||| || ||| | ||||| ||| ||| | || || ||||||
Sbjct 549567 CAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAAC 549508
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||||| | ||| | ||| ||||| | || || |||
Sbjct 549507 ATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGTGGT 549460
>seq4
Length=2565013
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
||||||| ||||| || || | || || || || |||| || || ||||| | |||
Sbjct 110344 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 110285
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
| ||| | ||| | |||| || || || ||||||||||| ||||| || || || |
Sbjct 110284 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC 110225
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
| || || || || |||||||| ||| | ||||| ||| || | || || |||||||
Sbjct 110224 AGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACA 110165
Query 22400 TTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || || || ||||| | || | || ||||| | || ||||||
Sbjct 110164 TCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGACTCCGAGGAGGT 110118
>seq11
Length=586936
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| || || || || || ||
Sbjct 305653 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 305712
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||| ||||||||||||||||| || || ||
Sbjct 305713 GATACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 305772
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || || || || ||| | ||||| || || | ||||| ||||||
Sbjct 305773 CAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAAC 305832
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || || | ||| | || | ||| | || || |||
Sbjct 305833 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGAGGTGGT 305880
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || || |||| || || || || | |
Sbjct 305881 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 305940
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || || || |||||||||||||| || || || ||
Sbjct 305941 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 306000
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || ||||| || ||| | ||||| || ||| ||||||| ||||||
Sbjct 306001 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAAC 306060
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 306061 ATCCAGAAGGAATCCAC 306077
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
|| |||| ||| | ||| | |||| || ||||| ||||||||||| ||||| || |
Sbjct 304920 CCTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGG 304979
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
| || || || || || || ||||| || ||| | ||||| || || | ||||| |
Sbjct 304980 ACCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACT 305039
Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||| || || || |||||| | ||| | ||| | ||| | || || |||
Sbjct 305040 ACAACATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGACTCCGAGGTGGT 305092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727790267165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |