Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 165 2e-35 seq1 125 1e-23 seq4 120 6e-22 >seq3 Length=2716294 Score = 165 bits (182), Expect = 2e-35 Identities = 556/856 (65%), Gaps = 16/856 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 856614 TCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 856673 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||||| | ||| || || || | | ||||| || |||||||| | Sbjct 856674 GAGTTGTAGACCTTGGAGTTGCCGAGAGCAACCAGCAGACGGTCGGCGACAAACTCAATG 856733 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||| || | | |||||| || | || || ||| || | || || | | Sbjct 856734 TACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACCACAGGGCAGGGCGTCGGTCAGG 856793 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGACAG 251801 || |||| ||| | |||| ||||| | | | ||| || | | | | || | Sbjct 856794 AACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACAATCTTCTTG-GAGGG 856852 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 |||||| || | ||| | || || | |||| | ||||||||||||||| || Sbjct 856853 TCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCG 856912 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| ||||||||| | ||||| ||||| | || || ||| |||||||||| Sbjct 856913 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAA 856972 Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981 ||| | | || || || ||||| | | |||||||| | | || | || || Sbjct 856973 GATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCG 857032 Query 251982 CTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTTCC 252038 ||| |||| ||||| ||| | || | |||| | ||||| | |||||||| Sbjct 857033 CTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTT 857092 Query 252039 AACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGAT 252098 | |||||| || ||||| || | || || || | ||||| ||||| ||| Sbjct 857093 GATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGAT 857152 Query 252099 GAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTA 252158 | | || | ||| || |||||| | ||||| |||||| || | | |||||| | Sbjct 857153 GTATGTGTCGATCAGCAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 857212 Query 252159 AGCATAGAA----TAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214 | ||||| | | | | || ||| | || || ||| || | | | Sbjct 857213 GCCGTAGAAGCACTTGGC-CTCG---GGGACCTGCACCTCGCCGGAGAATCGCTCCACCA 857268 Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274 |||||| |||| || |||||| | ||||||||| | || | | | ||||||| Sbjct 857269 GGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGA 857328 Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334 ||||| |||| ||||||| || ||||||| | ||||||| ||| || | Sbjct 857329 ACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCAATCT 857388 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACATCAGGGTAC 252393 | || | |||||||| | | | | |||||||||||||| ||| | | || ||||| Sbjct 857389 CCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGC-CAGATCTCGTGGTAC 857447 Query 252394 TTGATTGGGAA-AGCA 252408 | ||| ||||| |||| Sbjct 857448 TGGATGGGGAAGAGCA 857463 >seq1 Length=3339266 Score = 125 bits (138), Expect = 1e-23 Identities = 189/266 (71%), Gaps = 6/266 (2%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 |||||||| ||||| ||||||||||||||||| || | |||| | || | ||| Sbjct 1183041 TCTCTGTCTGGTGGATGGAAGATGAAGCTGGCTCTTGCCACCGCCGTCCTCCGAAAGGCC 1182982 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 ||| |||| |||||||||||||| |||||||| |||| ||| |||||| || ||||| Sbjct 1182981 GATATCCTGCTGCTTGATGAGCCCACCAACCATCTGGATACCGTCAACGTTGCTTGGCTG 1182922 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 || |||||| | || ||| | | | | ||| |||| ||||| ||||||||||| Sbjct 1182921 GTCAACTACCTCAACA-CCTGTGG--TATCACCTCCATCATCGTCTCCCACGACTCTGGT 1182865 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941 ||||| || ||| || ||| || ||||| |||| | | |||||| ||| Sbjct 1182864 TTCCTCGACAACGTCTGTGAGTACATTATCCACTACGAGCGA---TTCAAGCTCCGAAAG 1182808 Query 279942 CACATCGGCAACCTGTCTGCTTTCGT 279967 ||| || ||||| || | ||||| Sbjct 1182807 TACAAGGGTAACCTCTCCGAGTTCGT 1182782 Score = 118 bits (130), Expect = 2e-21 Identities = 133/174 (76%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||||||| ||||||| ||||| || || || |||| ||||||||||| ||| Sbjct 1183395 GGAGAGGATCTGTGTAACTGTGAGTTCTCTCTGGCTTACGGTGCCAAGATTCTGCTGAAC 1183336 Query 279405 TCTACCC-GCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 |||| || || || ||||||| ||| || || |||||| || ||||| || || Sbjct 1183335 CGAACCCAGCTTCGAC-TCAAGCGAGGCCGACGATACGGTCTCTGTGGCCCCAACGGTGC 1183277 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC 279517 |||||| ||| || ||||| |||||||| ||||| ||| | | ||| ||||| Sbjct 1183276 TGGTAAGTCCACCCTGATGCGAGCCATTGCCAACGGCCAGGTTG-AGGGTTTCC 1183224 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 280677 CTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAG 280736 || ||||| || |||||| || ||||||| || || || ||||| ||||| || ||| Sbjct 1182024 CTTGGTCTCGAGCCCGAGCTTGTCTCTCACTCCCGAATCCGAGGTCTGTCTGGTGGACAG 1181965 Query 280737 AAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796 |||||||| || || | | || | ||||| | || || |||||||||| || Sbjct 1181964 AAGGTCAAGCTGGTGCTTGCCGCCTGTACCTGGCAGCGACCCCATCTGATCGTTCTTGAT 1181905 Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 |||||||||||||||||||| || || || || |||||| Sbjct 1181904 GAGCCTACCAACTATCTGGATCGAGACTCTCTTGGAGCTCTG 1181863 >seq4 Length=2565013 Score = 120 bits (132), Expect = 6e-22 Identities = 414/637 (65%), Gaps = 13/637 (2%) Strand=Plus/Minus Query 293140 CGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACT 293199 || || ||||| | || || | | |||| ||| ||||||||| |||||||||| Sbjct 2495479 CGGTCGGCAGCCATCTCGATGATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGG 2495420 Query 293200 GCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATC 293259 |||||| || | | ||| | ||||| | || || || ||| | || Sbjct 2495419 TCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATT 2495360 Query 293260 TGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGA 293318 |||||||||| |||||| ||| || || || ||| || || || || | | Sbjct 2495359 CGGTTCTTCATGGTCTCGTTCCACAGACCAACCT-CAACCAGGTCCTTGAGCAGCCAGGG 2495301 Query 293319 GTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGGG 293378 |||||||| ||||||||||||| || || || ||||||||| || ||| ||| Sbjct 2495300 GTTGACAATCTGGAACTCACCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGG 2495241 Query 293379 TTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAGAGCAGT 293438 ||| ||| | ||| |||||||| ||| || ||||||||||| | || Sbjct 2495240 CTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAAGTGGAAGCGGTAGGCATGGGGGCCAC 2495181 Query 293439 CGTCAGAGAGTTCCTCACACC---CTTCTTGACACGCGATTCGAGACCCGCCCAGTCC-A 293494 | ||| ||||| | || || |||| ||| | | |||| | |||| ||| | Sbjct 2495180 CAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCA 2495121 Query 293495 GAGCAGTCTGAGGT-GTAACACCCCAGAGATGATACTGCATGATACCCTTGCTGGCAGGA 293553 |||| || |||| || || ||| || | | |||||| | ||||||| ||||||| Sbjct 2495120 GAGC--TCGGAGGGAGTCACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGA 2495063 Query 293554 GACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGCCTCAACA 293613 || |||| ||||| | | || | |||| | | |||| |||| |||||||| Sbjct 2495062 GAGCCCTGGAAGGTCTCGTAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACG 2495003 Query 293614 GCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCA 293673 ||| | ||| ||| ||||||||||| ||||||||| |||| ||| || || Sbjct 2495002 GCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCG 2494943 Query 293674 AACGGCATCTTCAGCTGG--AAGAACACATCCTGCAGACCCTGTACACCTACACCAACGG 293731 || |||| || | || | ||| ||| ||||||||| ||||| | | ||| || Sbjct 2494942 AAGGGCA--GTCGGAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGG 2494885 Query 293732 GGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAAC 293768 | || | ||| ||||| | ||| ||||| || || Sbjct 2494884 GTCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGAC 2494848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836260064481