Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 223 6e-53 seq4 159 6e-34 seq8 154 3e-32 seq11 152 9e-32 seq1 125 1e-23 >seq3 Length=2716294 Score = 223 bits (246), Expect = 6e-53 Identities = 593/893 (66%), Gaps = 25/893 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| ||||||||||| || || ||||| |||||||||||||| |||||| | Sbjct 856577 CATGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 856636 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| |||||||||||| |||||||| || | | ||||| || || Sbjct 856637 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCC 856696 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||| || || ||||| |||||||||| ||| || | | ||| Sbjct 856697 GAGAGCAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTT 856756 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 ||| || | || | ||||| | ||||||| | ||| |||| ||| | | || | Sbjct 856757 CATTCCGAGCAGACCACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGG- 856815 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAA------GGGACAGCTTGTTCTCGAGCTTCGA 10228 ||||||| || | | | || || ||| ||| | ||||||||| | ||| Sbjct 856816 --CCTCGACAAT-CACGT--CCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGA 856870 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 | || || |||| | ||| || |||||||| ||| ||||| ||||||||| Sbjct 856871 GAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGA 856930 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 || || ||||||||||| || || || |||||||| |||| | |||||| || Sbjct 856931 GAAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCC 856990 Query 10349 GGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAG---GAG 10403 ||||| |||||| ||||| ||| | | || | || ||||| | ||| || Sbjct 856991 GGAGA--AGAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGAC 857048 Query 10404 CGGTCGCGCGAAAAGTATTTCGAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGT 10462 |||| || | | || ||| ||||| | |||||||| | | ||||| || Sbjct 857049 TCGTCGTCGGAGATCCACTT-GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGT 857107 Query 10463 CTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAG 10522 |||||| || | ||| || | | | ||||| | ||||| || | || | || Sbjct 857108 CTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAG 857167 Query 10523 CAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATAC 10581 ||| ||||| || ||||| | |||| | |||| | ||||||| || Sbjct 857168 CAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTT 857227 Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGC 10641 | ||| |||| || || || ||| || | ||||||||| |||| || | Sbjct 857228 G-GCCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATAC 857286 Query 10642 CATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA 10701 ||||| | ||||||||| | || | |||| ||||||| ||||| || | ||| | Sbjct 857287 CATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGA 857346 Query 10702 G-TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAA 10760 | ||| | |||||| ||| |||| | ||| | | |||||| ||||||||||| Sbjct 857347 GCCGGTTCTC-CCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAA 857405 Query 10761 GTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 | || ||||||||||||||||||| | || ||| ||||| |||||||||| Sbjct 857406 GAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 857458 Score = 116 bits (128), Expect = 7e-21 Identities = 441/674 (65%), Gaps = 30/674 (4%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | |||||||||||| ||| | ||| ||| | ||| | || || | | Sbjct 942974 TATCGCCACTGCAGGTACTGGTTGGGCGTCTTTTCCTTGTGCTGCTCCACGTGCTGCAGA 942915 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || |||||||| | ||| | || |||| |||||| |||||| || |||| ||| Sbjct 942914 GCGTGCTGGGCAATGTATCCGATTCGCAGGTTGGGGTGCTTCTCGACCTTGCCCTCAGTA 942855 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || |||||||||| || |||||||| || || | ||| || || || ||||| || Sbjct 942854 GGCACCACCTCGCCGGTCAGCACCTTGATCAGGGTCGACTTTCCGGCTCCGTTGGGACCC 942795 Query 225158 ATCACGCCAATCCGGGATGACATTG-CAACCTGCGAGTTCACGTTGCTGAAGA----TCT 225212 | || | | || || ||||| | || | | || |||| || |||| || Sbjct 942794 AGAACAGCGACTCGAGACGACATGGACAGCGAACAAG-AGGCGTT-CTTAAGAGAGGGCT 942737 Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACG-CAGCTTCATG--ATGGCACGGTCCT 225269 ||| | | |||| | |||| | || || || | || | ||||| ||| | Sbjct 942736 TGGGGGCGTTGGGGTAGGTGAAGG--AGGCGTCGACAAC-TCGGGCAATGGCTCGGGTGT 942680 Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTT--GGTCACCGCGTC 225327 |||| | ||| ||| | ||||| ||||| || ||| ||| | ||| Sbjct 942679 TGGATCGCACACCTGACAGAATTCCGGGAGGAGGGAAGGCCATCTTCAGGT--TGGAGTC 942622 Query 225328 CTTCAGGTCGTAGTAAG--ATGCAGCCTCGGGTCG--CTTTGCCACGAAAGCAGACAGGT 225383 ||||| |||||| | ||| |||| ||||| | ||| || || | | ||||| Sbjct 942621 GGTCAGGGTGTAGTAGGCCTTGC--CCTCAGGTCGCACCTTG--ACAAAGTCGGCCAGGT 942566 Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTG 225443 | || || | ||||| || |||||||| ||| |||| | | || || | Sbjct 942565 TACCCTTGTAGTAGACCAGCTT---CTTGTTCTCGTAGTGAGCAATGTCGGTACAGACGG 942509 Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503 |||| |||||||| |||||||| || ||||| | || | | || || || || | Sbjct 942508 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCCACCA 942449 Query 225504 GGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562 ||| || || ||||| ||||||| || |||| ||||| ||||| || || || Sbjct 942448 GGT-AGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCATCGAGC 942390 Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622 ||||| ||||| || | ||||| ||||| || | || ||||||||| ||||| || Sbjct 942389 AGCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCATCCT 942330 Query 225623 CCGGACAGGGAGCC 225636 || ||||| | ||| Sbjct 942329 CCAGACAGAGCGCC 942316 >seq4 Length=2565013 Score = 159 bits (176), Expect = 6e-34 Identities = 171/226 (76%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| || | ||| || |||||||| || |||||||| || || || Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || |||| || ||||| || ||| Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || |||||||| | || || || Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 110298 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || || || ||||||||||| || || |||| Sbjct 110299 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344 >seq8 Length=911341 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | || || |||||||| || |||||||| || || || Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || |||| || ||||| || ||| Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| || || || || ||||||||||| || ||||||||| Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATT 549688 >seq11 Length=586936 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || || ||||| || |||||||| || ||||| Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || |||| || ||||| || ||| Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | ||||||| || ||||| || | || || || Sbjct 305759 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 305700 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| ||||| || ||||||||||| || |||||||| Sbjct 305699 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 132 bits (146), Expect = 9e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | |||||| || ||||| ||||||| || ||||| || ||||| || ||| Sbjct 305250 CCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCC 305191 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| | ||||||| ||||| ||||| | || || || || | ||| Sbjct 305190 TTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTG 305131 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| ||||||||||| ||||| |||||||| Sbjct 305130 ATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 Score = 125 bits (138), Expect = 1e-23 Identities = 128/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || |||||||| || |||||||| || ||||| Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| ||||||| || ||||| || ||| Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 || || |||||||| |||||||| | ||||||| ||||||||||| Sbjct 304971 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTC 304925 >seq1 Length=3339266 Score = 125 bits (138), Expect = 1e-23 Identities = 475/730 (65%), Gaps = 19/730 (3%) Strand=Plus/Plus Query 225280 ACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTA 225339 |||||| ||||| |||||||||||||| | ||| || | | | | ||| ||||| Sbjct 1182694 ACCCTCAAGGAAACCGGGCTCGGGGAAAGAGAAGTTGATCTCGGAGGCACCCAGCTCGTA 1182753 Query 225340 GTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGT 225399 ||| || || || ||| ||||| | || ||||| || || ||| Sbjct 1182754 GTAGGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGAGGTTACCCTTGTACTTTCG 1182813 Query 225400 GAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGA 225459 |||||||| || |||||| || | ||| | || || ||| ||||| ||||| Sbjct 1182814 GAGCTTGAA--TCG-CTCGTAGTGGATAATGTACTCACAGACGTTGTCGAGGAAACCAGA 1182870 Query 225460 GTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCA 225519 ||||||||| || |||||||| | | | | |||| ||||||| ||| ||||| Sbjct 1182871 GTCGTGGGAGACGATGATGGAGGTGA--TACCACAGGTG-TTGAGGTAGTTGACCAGCCA 1182927 Query 225520 TGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATC 225579 || |||||| | |||| ||||| || || || || || |||||||| || || | Sbjct 1182928 AGCAACGTTGACGGTATCCAGATGGTTGGTGGGCTCATCAAGCAGCAGGATATCGGCCTT 1182987 Query 225580 AATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT 225639 ||||| |||| | |||| ||||||||| ||||| || || ||||| ||| ||| Sbjct 1182988 TCGGAGGACGGCGGTGGCAAGAGCCAGCTTCATCTTCCATCCACCAGACAGAGAGGTGAT 1183047 Query 225640 TGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCT---GGATAATGCG 225696 | | | | | | ||| || | | || || ||| || ||| Sbjct 1183048 GGGCATTCGGGTCATCTCGTCGGTGAACAGGAAGTCAAGCAGCTGCTTTCGGACCTCCTC 1183107 Query 225697 CTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATATACGGTCAT 225756 ||||| | | || || || || | |||| || || ||| || ||| | | Sbjct 1183108 CTCGGTACCGATG-GACTCGC--CG--GCGGTCTTTCG-GACGTAGTCGACAACGTTGGT 1183161 Query 225757 GTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAGAAGCAT 225815 ||| | | | |||||||||||||||| ||| | || || || || | | | Sbjct 1183162 GTCGGCGTGGGTACCGTCAATGTCGTGGTCGACGAAGACAGTTCGACACTCGTCCTGGGT 1183221 Query 225816 CGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGC 225875 |||||| ||||| | |||||| || ||||| || || | |||||| ||| || || | Sbjct 1183222 -GGGGAAACCCTCAACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCAC 1183280 Query 225876 CGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGC-GCGTGGAGTTC 225934 ||||||| || ||| ||||| | || ||||||| || || || | || |||| Sbjct 1183281 CGTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGA-GTCGAAGCTGGGTTCGGTTC 1183339 Query 225935 AGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCC 225994 || || |||||| |||| || || || |||||||| || | ||||| ||||| ||||| Sbjct 1183340 AGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCCCTCG 1183399 Query 225995 TCGGTCTCCT 226004 ||| ||||| Sbjct 1183400 TCGTCCTCCT 1183409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621927668520