Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 223 6e-53
seq4 159 6e-34
seq8 154 3e-32
seq11 152 9e-32
seq1 125 1e-23
>seq3
Length=2716294
Score = 223 bits (246), Expect = 6e-53
Identities = 593/893 (66%), Gaps = 25/893 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||| ||||||||||| || || ||||| |||||||||||||| |||||| |
Sbjct 856577 CATGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 856636
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| |||||||||||| |||||||| || | | ||||| || ||
Sbjct 856637 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCC 856696
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||| || || ||||| |||||||||| ||| || | | |||
Sbjct 856697 GAGAGCAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTT 856756
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
||| || | || | ||||| | ||||||| | ||| |||| ||| | | || |
Sbjct 856757 CATTCCGAGCAGACCACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGG- 856815
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAA------GGGACAGCTTGTTCTCGAGCTTCGA 10228
||||||| || | | | || || ||| ||| | ||||||||| | |||
Sbjct 856816 --CCTCGACAAT-CACGT--CCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGA 856870
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
| || || |||| | ||| || |||||||| ||| ||||| |||||||||
Sbjct 856871 GAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGA 856930
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| || ||||||||||| || || || |||||||| |||| | |||||| ||
Sbjct 856931 GAAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCC 856990
Query 10349 GGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAG---GAG 10403
||||| |||||| ||||| ||| | | || | || ||||| | ||| ||
Sbjct 856991 GGAGA--AGAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGAC 857048
Query 10404 CGGTCGCGCGAAAAGTATTTCGAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGT 10462
|||| || | | || ||| ||||| | |||||||| | | ||||| ||
Sbjct 857049 TCGTCGTCGGAGATCCACTT-GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGT 857107
Query 10463 CTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAG 10522
|||||| || | ||| || | | | ||||| | ||||| || | || | ||
Sbjct 857108 CTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAG 857167
Query 10523 CAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATAC 10581
||| ||||| || ||||| | |||| | |||| | ||||||| ||
Sbjct 857168 CAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTT 857227
Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGC 10641
| ||| |||| || || || ||| || | ||||||||| |||| || |
Sbjct 857228 G-GCCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATAC 857286
Query 10642 CATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA 10701
||||| | ||||||||| | || | |||| ||||||| ||||| || | ||| |
Sbjct 857287 CATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGA 857346
Query 10702 G-TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAA 10760
| ||| | |||||| ||| |||| | ||| | | |||||| |||||||||||
Sbjct 857347 GCCGGTTCTC-CCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAA 857405
Query 10761 GTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813
| || ||||||||||||||||||| | || ||| ||||| ||||||||||
Sbjct 857406 GAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 857458
Score = 116 bits (128), Expect = 7e-21
Identities = 441/674 (65%), Gaps = 30/674 (4%)
Strand=Plus/Minus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||| ||| | ||| ||| | ||| | || || | |
Sbjct 942974 TATCGCCACTGCAGGTACTGGTTGGGCGTCTTTTCCTTGTGCTGCTCCACGTGCTGCAGA 942915
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| |||||||| | ||| | || |||| |||||| |||||| || |||| |||
Sbjct 942914 GCGTGCTGGGCAATGTATCCGATTCGCAGGTTGGGGTGCTTCTCGACCTTGCCCTCAGTA 942855
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| |||||||||| || |||||||| || || | ||| || || || ||||| ||
Sbjct 942854 GGCACCACCTCGCCGGTCAGCACCTTGATCAGGGTCGACTTTCCGGCTCCGTTGGGACCC 942795
Query 225158 ATCACGCCAATCCGGGATGACATTG-CAACCTGCGAGTTCACGTTGCTGAAGA----TCT 225212
| || | | || || ||||| | || | | || |||| || |||| ||
Sbjct 942794 AGAACAGCGACTCGAGACGACATGGACAGCGAACAAG-AGGCGTT-CTTAAGAGAGGGCT 942737
Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACG-CAGCTTCATG--ATGGCACGGTCCT 225269
||| | | |||| | |||| | || || || | || | ||||| ||| |
Sbjct 942736 TGGGGGCGTTGGGGTAGGTGAAGG--AGGCGTCGACAAC-TCGGGCAATGGCTCGGGTGT 942680
Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTT--GGTCACCGCGTC 225327
|||| | ||| ||| | ||||| ||||| || ||| ||| | |||
Sbjct 942679 TGGATCGCACACCTGACAGAATTCCGGGAGGAGGGAAGGCCATCTTCAGGT--TGGAGTC 942622
Query 225328 CTTCAGGTCGTAGTAAG--ATGCAGCCTCGGGTCG--CTTTGCCACGAAAGCAGACAGGT 225383
||||| |||||| | ||| |||| ||||| | ||| || || | | |||||
Sbjct 942621 GGTCAGGGTGTAGTAGGCCTTGC--CCTCAGGTCGCACCTTG--ACAAAGTCGGCCAGGT 942566
Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTG 225443
| || || | ||||| || |||||||| ||| |||| | | || || |
Sbjct 942565 TACCCTTGTAGTAGACCAGCTT---CTTGTTCTCGTAGTGAGCAATGTCGGTACAGACGG 942509
Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503
|||| |||||||| |||||||| || ||||| | || | | || || || || |
Sbjct 942508 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCCACCA 942449
Query 225504 GGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562
||| || || ||||| ||||||| || |||| ||||| ||||| || || ||
Sbjct 942448 GGT-AGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCATCGAGC 942390
Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622
||||| ||||| || | ||||| ||||| || | || ||||||||| ||||| ||
Sbjct 942389 AGCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCATCCT 942330
Query 225623 CCGGACAGGGAGCC 225636
|| ||||| | |||
Sbjct 942329 CCAGACAGAGCGCC 942316
>seq4
Length=2565013
Score = 159 bits (176), Expect = 6e-34
Identities = 171/226 (76%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || |||| || | ||| || |||||||| || |||||||| || || ||
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || |||| || ||||| || |||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| || |||||||| | || || ||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 110298
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460
|| | ||||||||| || || || ||||||||||| || || ||||
Sbjct 110299 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq8
Length=911341
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| || | || || |||||||| || |||||||| || || ||
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || |||| || ||||| || |||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | |||||| || || || || ||||||||||| || |||||||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATT 549688
>seq11
Length=586936
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| || || || ||||| || |||||||| || |||||
Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || |||| || ||||| || |||
Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| | ||||||| || ||||| || | || || ||
Sbjct 305759 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 305700
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 305699 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 132 bits (146), Expect = 9e-26
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || ||||| ||||||| || ||||| || ||||| || |||
Sbjct 305250 CCATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCC 305191
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| || ||||| | ||||||| ||||| ||||| | || || || || | |||
Sbjct 305190 TTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTG 305131
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| ||||||||||| ||||| ||||||||
Sbjct 305130 ATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093
Score = 125 bits (138), Expect = 1e-23
Identities = 128/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| || || |||||||| || |||||||| || |||||
Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||||| || ||||| || |||
Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
|| || |||||||| |||||||| | ||||||| |||||||||||
Sbjct 304971 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTC 304925
>seq1
Length=3339266
Score = 125 bits (138), Expect = 1e-23
Identities = 475/730 (65%), Gaps = 19/730 (3%)
Strand=Plus/Plus
Query 225280 ACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTA 225339
|||||| ||||| |||||||||||||| | ||| || | | | | ||| |||||
Sbjct 1182694 ACCCTCAAGGAAACCGGGCTCGGGGAAAGAGAAGTTGATCTCGGAGGCACCCAGCTCGTA 1182753
Query 225340 GTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGT 225399
||| || || || ||| ||||| | || ||||| || || |||
Sbjct 1182754 GTAGGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGAGGTTACCCTTGTACTTTCG 1182813
Query 225400 GAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGA 225459
|||||||| || |||||| || | ||| | || || ||| ||||| |||||
Sbjct 1182814 GAGCTTGAA--TCG-CTCGTAGTGGATAATGTACTCACAGACGTTGTCGAGGAAACCAGA 1182870
Query 225460 GTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCA 225519
||||||||| || |||||||| | | | | |||| ||||||| ||| |||||
Sbjct 1182871 GTCGTGGGAGACGATGATGGAGGTGA--TACCACAGGTG-TTGAGGTAGTTGACCAGCCA 1182927
Query 225520 TGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATC 225579
|| |||||| | |||| ||||| || || || || || |||||||| || || |
Sbjct 1182928 AGCAACGTTGACGGTATCCAGATGGTTGGTGGGCTCATCAAGCAGCAGGATATCGGCCTT 1182987
Query 225580 AATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT 225639
||||| |||| | |||| ||||||||| ||||| || || ||||| ||| |||
Sbjct 1182988 TCGGAGGACGGCGGTGGCAAGAGCCAGCTTCATCTTCCATCCACCAGACAGAGAGGTGAT 1183047
Query 225640 TGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCT---GGATAATGCG 225696
| | | | | | ||| || | | || || ||| || |||
Sbjct 1183048 GGGCATTCGGGTCATCTCGTCGGTGAACAGGAAGTCAAGCAGCTGCTTTCGGACCTCCTC 1183107
Query 225697 CTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATATACGGTCAT 225756
||||| | | || || || || | |||| || || ||| || ||| | |
Sbjct 1183108 CTCGGTACCGATG-GACTCGC--CG--GCGGTCTTTCG-GACGTAGTCGACAACGTTGGT 1183161
Query 225757 GTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAGAAGCAT 225815
||| | | | |||||||||||||||| ||| | || || || || | | |
Sbjct 1183162 GTCGGCGTGGGTACCGTCAATGTCGTGGTCGACGAAGACAGTTCGACACTCGTCCTGGGT 1183221
Query 225816 CGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGC 225875
|||||| ||||| | |||||| || ||||| || || | |||||| ||| || || |
Sbjct 1183222 -GGGGAAACCCTCAACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCAC 1183280
Query 225876 CGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGC-GCGTGGAGTTC 225934
||||||| || ||| ||||| | || ||||||| || || || | || ||||
Sbjct 1183281 CGTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGA-GTCGAAGCTGGGTTCGGTTC 1183339
Query 225935 AGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCC 225994
|| || |||||| |||| || || || |||||||| || | ||||| ||||| |||||
Sbjct 1183340 AGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCCCTCG 1183399
Query 225995 TCGGTCTCCT 226004
||| |||||
Sbjct 1183400 TCGTCCTCCT 1183409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621927668520
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