Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 3e-34
>seq6
Length=1972418
Score = 159 bits (176), Expect = 3e-34
Identities = 386/575 (67%), Gaps = 27/575 (5%)
Strand=Plus/Minus
Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247
||||| | ||| || || |||| || ||||| | ||| || ||| | || | || ||
Sbjct 1597456 TTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTCTCCACAGTCCA-GATCGGTCAC 1597398
Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307
|| |||| ||| ||| || || | |||| ||||||||| || ||||| |||| |||
Sbjct 1597397 CTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAATGTTGAAGGGAACACCCAGACC 1597338
Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGC--TCACCG-TCAG---------- 20354
|| || | |||| ||| ||||||||||| || ||| || || ||||
Sbjct 1597337 CAGATCACATGACCGCTGGTACAGCTGACACGACAGCCGTCCTCGCTCAGAGTTCTTGTA 1597278
Query 20355 CTACA--TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412
| ||| || || || || |||| ||| ||||| ||||| ||||| |||| ||| ||
Sbjct 1597277 CGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAAGAGCCATTTTGGACAGGTCAGC 1597218
Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAAT 20468
|||||||| || ||| |||||||| | || || || || |||| | | ||
Sbjct 1597217 GGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAGGGTTGGTTTTGAGAGTGTGGAT 1597158
Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528
| | ||| || || || | |||||||| || || || | || ||| ||
Sbjct 1597157 CACC--TGTTTGAGC--TGATCCACACCCTGGCCAGTGTAATCTGTGTCACAATCCTTGT 1597102
Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588
| | || ||||| || | ||| ||||| || || |||||||||| || ||||| | ||
Sbjct 1597101 ATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACAGGTCCCAGGTCTCCCTCACGTC 1597042
Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
| || ||| || | |||| |||||| |||| |||||| |||||| || | ||
Sbjct 1597041 TATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGATCCATTTCCGTCCCAAATAT-GA 1596983
Query 20649 CTCCTGTTCTTGAA-AGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCT 20707
| | || | | |||| | || ||| |||| || || |||||| || |||||
Sbjct 1596982 ATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACCAGAGAAGCTCC 1596923
Query 20708 TGCACTACGCCTCGCCAAAACACCCGCTTTGTGGT 20742
| || |||||||| |||| ||||||||||||||
Sbjct 1596922 TCCAAAACGCCTCGGTAAAAAACCCGCTTTGTGGT 1596888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372573796440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |