Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 159 3e-34 >seq6 Length=1972418 Score = 159 bits (176), Expect = 3e-34 Identities = 386/575 (67%), Gaps = 27/575 (5%) Strand=Plus/Minus Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247 ||||| | ||| || || |||| || ||||| | ||| || ||| | || | || || Sbjct 1597456 TTGTACACGTGAGCGTCGCCCATGGTATGAATGAGCTCTCCACAGTCCA-GATCGGTCAC 1597398 Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307 || |||| ||| ||| || || | |||| ||||||||| || ||||| |||| ||| Sbjct 1597397 CTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAATGTTGAAGGGAACACCCAGACC 1597338 Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGC--TCACCG-TCAG---------- 20354 || || | |||| ||| ||||||||||| || ||| || || |||| Sbjct 1597337 CAGATCACATGACCGCTGGTACAGCTGACACGACAGCCGTCCTCGCTCAGAGTTCTTGTA 1597278 Query 20355 CTACA--TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 | ||| || || || || |||| ||| ||||| ||||| ||||| |||| ||| || Sbjct 1597277 CGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAAGAGCCATTTTGGACAGGTCAGC 1597218 Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAAT 20468 |||||||| || ||| |||||||| | || || || || |||| | | || Sbjct 1597217 GGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAGGGTTGGTTTTGAGAGTGTGGAT 1597158 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528 | | ||| || || || | |||||||| || || || | || ||| || Sbjct 1597157 CACC--TGTTTGAGC--TGATCCACACCCTGGCCAGTGTAATCTGTGTCACAATCCTTGT 1597102 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588 | | || ||||| || | ||| ||||| || || |||||||||| || ||||| | || Sbjct 1597101 ATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACAGGTCCCAGGTCTCCCTCACGTC 1597042 Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 | || ||| || | |||| |||||| |||| |||||| |||||| || | || Sbjct 1597041 TATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGATCCATTTCCGTCCCAAATAT-GA 1596983 Query 20649 CTCCTGTTCTTGAA-AGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCT 20707 | | || | | |||| | || ||| |||| || || |||||| || ||||| Sbjct 1596982 ATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACCAGAGAAGCTCC 1596923 Query 20708 TGCACTACGCCTCGCCAAAACACCCGCTTTGTGGT 20742 | || |||||||| |||| |||||||||||||| Sbjct 1596922 TCCAAAACGCCTCGGTAAAAAACCCGCTTTGTGGT 1596888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372573796440