Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 7e-22
seq3 118 2e-21
>seq1
Length=3339266
Score = 120 bits (132), Expect = 7e-22
Identities = 133/175 (76%), Gaps = 2/175 (1%)
Strand=Plus/Plus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || |||| ||| ||||| |||| || |||||||| || || ||||| || ||
Sbjct 1183222 GGGGAAACCCTCAACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCACC 1183281
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACC-GCGTATTGTTCA 334299
||| || ||||| |||||||| || || ||||| || | ||| | | || |||||
Sbjct 1183282 GTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGAG-TCGAAGCTGGGTTCGGTTCA 1183340
Query 334300 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
| ||||| || |||| || |||||||| || ||||| | |||||||||||| ||
Sbjct 1183341 GCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCC 1183395
>seq3
Length=2716294
Score = 118 bits (130), Expect = 2e-21
Identities = 213/309 (69%), Gaps = 7/309 (2%)
Strand=Plus/Minus
Query 333687 TCGGTAAGGGCGTAGTAA--CTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGAT 333744
||||| |||| |||||| || || || || ||| ||| || || |||| ||| |
Sbjct 942623 TCGGTCAGGGTGTAGTAGGCCTTGCCC--TCAGGTCGCACCTTGACAAAGTCGGCCAGGT 942566
Query 333745 TTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAG 333804
| |||||||| | |||||| ||| ||||| || ||| ||| || || |
Sbjct 942565 TACCCTTGTAGTAGACCAGCTTCTTGTTC---TCGTAGTGAGCAATGTCGGTACAGACGG 942509
Query 333805 CGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCA 333864
|||| ||||| |||||||||||||| ||||||| | | | ||| || || | ||
Sbjct 942508 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCCACCA 942449
Query 333865 GGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAA 333924
|||| || ||||||| | ||||| |||| |||||||| || ||||| || || |
Sbjct 942448 GGTAGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCATCGAGCA 942389
Query 333925 GTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTC 333984
| || | | || |||| |||||| || || || || | || ||||| ||||| ||||
Sbjct 942388 GCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCATCCTC 942329
Query 333985 CTGAAAGAG 333993
| || ||||
Sbjct 942328 CAGACAGAG 942320
Score = 100 bits (110), Expect = 6e-16
Identities = 548/865 (63%), Gaps = 25/865 (3%)
Strand=Plus/Minus
Query 242875 TTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGG 242934
|||||||||||||| | || || ||| | ||||| |||||||| | ||| | || |||
Sbjct 857458 TTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG 857399
Query 242935 ACCACCGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAAC---TCAAT 242991
||| ||||||| || ||| | ||| | | ||||||| ||||| | ||||
Sbjct 857398 ACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGG---GAGAACCGGCTCAAC 857342
Query 242992 GACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATT 243051
||||||| || |||||| ||| | || | || || || | ||||||||||||
Sbjct 857341 AACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATT 857282
Query 243052 GTGATGGAAAATCTGCAG-ACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCA 243110
|||| || || ||| | | | | | | | | | || ||| || ||||| |
Sbjct 857281 GTGAACGAGAACCTGGTGGAGCGATTCTCCGGCG-AGGTGCAGGTCCCCGAGGCCAAGTG 857223
Query 243111 ATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTTCTTAT 243170
|| || | | ||| | | | || ||||| || ||| || | || || ||
Sbjct 857222 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGAT 857163
Query 243171 CGACGCGCTTATTTCAGATGAAC---AAGAGCGAAACGAGCTTTTCGACGCCATCGAAAA 243227
|||| | || ||| | || | | ||||||| | | || ||| |||||||||| |
Sbjct 857162 CGACACA--TACATCA-AGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGAC 857106
Query 243228 CATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTA---GAACCCG-GTA 243283
||| || | | || ||||| | ||||| | |||||| | || || ||
Sbjct 857105 CATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTC 857046
Query 243284 AATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGA 243343
| | || || ||||| || | || | | ||| || || || | || |||||
Sbjct 857045 GACCTTTGGC-GAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCT 856987
Query 243344 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403
||| | ||||||| ||||| ||| |||| | ||||| |||||| | || |
Sbjct 856986 CGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCA 856927
Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463
||||| ||||| || |||||||| || ||| | || | || | | ||
Sbjct 856926 ACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGC 856867
Query 243464 AGCTCCAGAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTG 243520
| ||| ||||| | ||| | | | | | ||| | | | || || || ||||
Sbjct 856866 ACCTCGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTG 856810
Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580
| ||| |||| ||| | |||||| | || || | || | || |||||| |
Sbjct 856809 GTATCGAGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCA 856750
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
| |||||| | |||||||| || || || |||||||| | | | || || || |
Sbjct 856749 AGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACT 856690
Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700
|| || |||||||||| |||||||| | ||| |||||| ||| ||||| || |
Sbjct 856689 CCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCA 856630
Query 243701 AAACTAACTTCTTCGAAAAGCGTGT 243725
| || ||||||||||| ||||| ||
Sbjct 856629 AGACCAACTTCTTCGAGAAGCGGGT 856605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879420643350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |