Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 237 2e-57 seq3 140 4e-28 seq2 98.7 1e-15 >seq4 Length=2565013 Score = 237 bits (262), Expect = 2e-57 Identities = 1134/1780 (64%), Gaps = 43/1780 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| ||||| || ||| | | ||| ||||||||||| || |||||||| | Sbjct 2495637 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 2495578 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 ||| ||||||| | || | ||||| || | | |||| | || || | ||| Sbjct 2495577 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 2495518 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||| | ||||| || || |||||| | || || || ||||| || || | Sbjct 2495517 GGATGTTGAGGGACTGGGACTGGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGATGA 2495458 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 |||| || |||||||| || |||| |||| ||| || || | ||||| | Sbjct 2495457 TTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATGT 2495398 Query 113805 CCACGATATTTTGGATGGAGCCAC---CCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 ||| || || | ||| || | ||| || || | | |||||| || Sbjct 2495397 TGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTCGT 2495341 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921 ||| ||||||| || || |||| | || ||||||| ||||||| Sbjct 2495340 TCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTCAC 2495281 Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 | || || |||| ||| || || |||| ||||| ||||| |||||||| ||| Sbjct 2495280 CAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAG 2495222 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 || | || || | ||||| || || |||||||| |||| || || ||| || | Sbjct 2495221 CCGAGAATCTGAGAAGTGGAAGCGGTAGGCATGGGGGCCACCAGCAGCGAGTTTCGCATT 2495162 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTC---C 114097 || | | | | || ||||||| ||||||| || || |||| | | Sbjct 2495161 CCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAG---AGCTCGGAGGGAGTC 2495105 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 | | ||||| |||||||| ||| ||| | |||||| || || |||| || |||||| Sbjct 2495104 ACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTCTCG 2495045 Query 114158 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217 || | || || | |||| ||| | ||||| | ||| |||| || || ||| Sbjct 2495044 TAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACCGTGGTAGATGGTC 2494985 Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277 || || || | || | ||||||||| ||||| || || | |||||| Sbjct 2494984 TCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCGAAGGGCAGTCGGAGGGCC 2494925 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 || || ||| || ||||| |||||||| || |||| || || |||| ||| || ||| Sbjct 2494924 ATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTTGGAC 2494865 Query 114338 TTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394 || || ||| || || || | || | || || | || || ||| Sbjct 2494864 TTCTTGGC---CTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGGCGTTGAGGTTTCGC 2494808 Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGA--GTCTCTTC- 114450 | ||||| | || || || ||||| | | | || | | | | ||||| || Sbjct 2494807 ACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGGTCTCGTCT 2494748 Query 114451 --ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | ||||| | | || || ||||| || ||||| || || |||| | |||||| | Sbjct 2494747 CGAGTGACAAAGGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGA 2494688 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| | ||| || ||||| || ||| ||| ||||| |||| |||||| Sbjct 2494687 GAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAGGTTCTTC 2494628 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || |||||| ||| || || |||||||| |||||| | || | || | ||| || Sbjct 2494627 TGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTC 2494568 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGC-TCGCC 114686 ||| | | ||||| | ||| | | || | ||| || | || ||| | | ||| | Sbjct 2494567 TGGCAGTCCAGAATGTGGTACCACAGCTTCTG-GGCAGGGATGGTT-CGTCGACCTCGGC 2494510 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGG-GCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 |||||| |||||||| ||| || |||| || ||| ||||| | | || ||| Sbjct 2494509 CCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAA-CTCGTCACCGTAGACGTCATCGAGG 2494451 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 || || || | ||||| | ||||| ||| | | || ||| || |||| |||| Sbjct 2494450 CCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACTCGCTCCATG 2494391 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || ||||| || ||||||||||| ||| ||||| || ||| || || | || Sbjct 2494390 AACAGGTCGGGAATCCAGAGAGCCAGGAACAGATCTCGGGCTCGAATCTCCTCCTTACCG 2494331 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || |||| ||| | || || | || || ||||||| || |||||||||| Sbjct 2494330 TGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATG 2494271 Query 114926 GCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 || | | || ||| | | || |||||| || || | || ||| || Sbjct 2494270 GCAAAGGCTCCGGGTCGCTT--GTTG-CCTCCCTGGTCGACGTATCGAGCGGTGTTGTTG 2494214 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039 | || || ||||| || | |||||| | || || || || || ||| || Sbjct 2494213 TAGACACGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGAT 2494154 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 |||||| || | |||||| || ||| ||||| || || |||| ||||| | Sbjct 2494153 CCGGTGGCTCGGATGTTGTGGATGGACAGACCGATACCTCCAGCGGACTTGGAGATGAGA 2494094 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 || || | |||| || ||||||| |||||||| ||||| |||| | || |||| Sbjct 2494093 GCACAAGTCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGG 2494034 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 || || |||||| || ||| || || || |||||| | ||||| || | |||||| Sbjct 2494033 AAACACGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGG 2493974 Query 115220 ATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| ||| ||| ||||| | | ||||||||| | | | || ||||| || || Sbjct 2493973 GTGAA-GTACTTTTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAATGTTGTCGCC 2493915 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 ||| ||||||| || || ||||| | ||| | |||||| Sbjct 2493914 GTGGATACCGACAGACACTCGCATGATCATCTGCTGGGGT 2493875 >seq3 Length=2716294 Score = 140 bits (154), Expect = 4e-28 Identities = 349/522 (67%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 125768 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 125827 |||||||||||||||||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 856605 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 856664 Query 125828 GGGTTCTTTGAGTTCCAAA--TTG---TTGGC-ACCCCAATCTGTTTGAGGAGACGATCC 125881 ||||| | ||||| | | ||| ||| | | ||| | || ||||| || Sbjct 856665 GGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGAGAGCAACC------AGCAGACGGTCG 856718 Query 125882 GAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGG 125941 | ||| |||||||||||| |||| || | |||||| |||| || ||| || Sbjct 856719 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGACCACAGGGC 856778 Query 125942 AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATG 126001 || ||||| | |||| ||| ||| || | ||||| || | | | | | | Sbjct 856779 AGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACA 856838 Query 126002 GTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCTTGGTG 126060 | | | |||| || | | | || | |||||| |||||| || ||| Sbjct 856839 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTG 856897 Query 126061 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCG 126120 ||||||||||| ||||||||||| || || |||||| || || ||||||||||| || Sbjct 856898 CAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 856957 Query 126121 CTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGC 126180 |||||| | |||||| || | || || || ||||||||||| ||||| || || Sbjct 856958 CTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGC 857017 Query 126181 GAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTCATCGC 126237 || || | || ||||| |||||| ||||| | || | | |||||| | ||| Sbjct 857018 AAAAGCTATCAGCCGCTCGCCAAAGG---TCGACTCGTCGTCGGAGATCCACTTGAGCGC 857074 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||| | ||||| |||| ||| || |||| ||||| ||| || Sbjct 857075 CCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 857116 >seq2 Length=3147093 Score = 98.7 bits (108), Expect = 1e-15 Identities = 456/717 (64%), Gaps = 29/717 (4%) Strand=Plus/Minus Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 |||||||| |||| ||| || ||| |||||||||| ||||| || || || || | | Sbjct 1304643 ATTTCCGTGCACAGATTGGACGACTTGATGGTGCCCAGGTTCTGCTGGTTGGATTTGGCG 1304584 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || |||||||| |||||| | || || || || | || | |||| || Sbjct 1304583 TTGCAGCTGTCCTTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTGACTCGTGAGGATC 1304524 Query 114644 GCCTTCCAGACATCG-GCGGCTGGCACAGTGGCGTTGG-CTCGCCC-----CTC---CTC 114693 ||||| | | || ||| | | | | ||||||| | |||| ||| ||| Sbjct 1304523 GCCTTGAACAGCTCCTGCGCGTTGATCTG-GGCGTTGAACAAGCCCTTTTTCTCGTACTC 1304465 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 |||||||||| ||| |||| || | ||| | ||| ||||| || || Sbjct 1304464 CTCGTACTTTT--------GCT-CAAAGTCCGCTCCCCACACGTCTTCCAGCCCAGGGGC 1304414 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 | | | ||| ||||| | ||||| | | || || || ||||||||||| ||||| Sbjct 1304413 CCTCTTTGGACAGAACAAGGACCACTTTTCGCCTCTTTCCACCCGCTTCATGAACAGGTC 1304354 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 || | ||| | || |||| || || | | ||||| | || || || Sbjct 1304353 CGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCTGTTCTCTTCCGCTCCGTGGTTTTT 1304294 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 |||| | || || || | |||||||| ||||| || ||||| || | || | | Sbjct 1304293 CCGCAGGTTCAGGAAATCGAATATATCCGCATGCCAGGGCTCCAGATAGATGGCAAACGC 1304234 Query 114934 CCCCTTACGACGA---CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAG 114990 || ||| ||| |||||| ||||||| ||| ||| || || || | || Sbjct 1304233 TCCGGGACGCTTGTTCCCACCCTGGTCGACATACCGCGCAGTGTTGTTGAAAACCCTGAG 1304174 Query 114991 CATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCT 115050 ||| |||| |||||| || || | | ||| ||| || |||||||| Sbjct 1304173 CATGGGAACAATACCACTGGACCTTCCCTGAGACCCAGTAATGATAGCACCCTTGGCTCT 1304114 Query 115051 GACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 || || ||| || |||| ||| ||||| || ||| || ||||||||||| ||| | | Sbjct 1304113 GATATTATGAATATGCAGACCGATACCTCCAGCCGTTTTCGAGATTTGCGCACACGTCTT 1304054 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTC---ACCCTTATTTGCGATAAGGAAGCAGCT 115167 ||| | ||||||| |||||||| ||||| || || || | || || ||| Sbjct 1304053 GAGGGTATCGTAGATTCCGTCGATGGAGTCGGATGCCATA---GCCACCAGAAAACAGGA 1303997 Query 115168 CGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||||| |||| | || ||||| || ||||| || || || | ||||| |||| Sbjct 1303996 CGACAGTTGTCCCTGGGGAGTACCGGCATTGAAAAGCGTGGGAGAAGCGTGTGTGAA 1303940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353293856280