Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq11 120 3e-22 seq8 113 5e-20 >seq4 Length=2565013 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| | |||| || | |||| ||| |||||| || || ||||| |||| Sbjct 110118 ACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 110177 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || |||| || |||||||| || ||||| || |||||||||||||| | || Sbjct 110178 AAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGG 110237 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || |||||||||| ||| || |||| ||| | | | |||||| || |||| Sbjct 110238 AATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCA 110296 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 42207 | |||| |||||||| ||||| || || ||||| ||||||||||||| Sbjct 110297 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344 >seq11 Length=586936 Score = 120 bits (132), Expect = 3e-22 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | |||||| || |||| || ||||||||||||||||| Sbjct 305844 CTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAA 305785 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || |||||||||||||| | || | | |||||||||| ||| | || | |||| || Sbjct 305784 GATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC-TGAATCTTGGACTTGA-CG 305727 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | || ||| || || || |||| |||||||| || || || || ||||| Sbjct 305726 TTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTG 305667 Query 42195 ACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 305666 ACAAAGATCTGCAT 305653 Score = 96.9 bits (106), Expect = 4e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | || || || |||| || ||||||||||| ||||| Sbjct 306071 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 306012 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || |||||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 306011 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 305953 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || || || |||| |||||||| || || || || ||||| || Sbjct 305952 GTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCAC 305893 Query 42197 AAAGATTTGCAT 42208 || || ||||| Sbjct 305892 GAAAATCTGCAT 305881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||| ||| | ||| |||||| || || ||||| || | |||||| || |||| || Sbjct 305073 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305014 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||||||||| ||||| ||||||||||||||||| | || | | |||||||||| Sbjct 305013 AGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 304957 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||||||||||||||| ||||||||||||||||| | || | | ||||||| Sbjct 305247 TCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTG 305188 Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| ||| | | | |||||| || || || |||| ||||| Sbjct 305187 TCCTGGATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAGGACTCAACCTCGAGAGTGAT 305129 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || || ||||| || || || ||||| Sbjct 305128 GGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 >seq8 Length=911341 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||| | |||| || | ||| | ||| |||||| || || ||||| |||| Sbjct 549460 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 549519 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || |||| || ||||||||||| ||||| || |||||||||||||| | || Sbjct 549520 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 549579 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | |||||||||| ||| || |||| ||| | | | |||||| || |||| Sbjct 549580 AATTCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCA 549638 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTT 42210 | || | ||||| || || || || || ||||| ||||| || ||||||| Sbjct 549639 CCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212521603440