Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 seq8 86.0 6e-12 >seq11 Length=586936 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | || ||||| || || |||||||| || | || ||| || |||| Sbjct 306092 AGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCC 306033 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| ||||| | || || ||||||||||| || || || || || || || Sbjct 306032 TCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 305973 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || ||| | || || || | || | |||| Sbjct 305972 TGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTC 305913 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | || || |||||||| ||||| Sbjct 305912 TTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||||| || || || || || |||||||| || | Sbjct 305092 ACCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 305033 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||| ||||| ||||||| ||||||||||| || || Sbjct 305032 CAGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGG 304973 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 |||||| || || || || || || Sbjct 304972 AATTCCCTCCTTGTCCTGAATCTT 304949 >seq8 Length=911341 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || || || || || |||||||| || | Sbjct 549460 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 549519 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| || |||||||| ||||| | || || ||||||||||| || || Sbjct 549520 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 549579 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || || || || || ||| || || | || || | ||||| Sbjct 549580 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 549639 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTT 64445 || | || | ||||| ||||| | || || || ||||| ||||||| Sbjct 549640 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644543932040