Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
seq11 118 1e-21
seq8 113 4e-20
seq4 98.7 1e-15
seq1 82.4 8e-11
>seq3
Length=2716294
Score = 161 bits (178), Expect = 1e-34
Identities = 490/748 (66%), Gaps = 13/748 (2%)
Strand=Plus/Minus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
||| | |||||||| | || ||| ||||||| |||| ||||| || || ||||| |
Sbjct 857344 AACAACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGT 857285
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGA-ACGTTCCGGAACTCGAGGCGCA 52204
|| |||||| ||||| | ||| || | ||| | || | || | |||||| |
Sbjct 857284 ATTGTGAACGAGAACCTGGTGGAGCG-ATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAA 857226
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| ||| || || || | | || ||| | | ||| |||| | |||| |||||
Sbjct 857225 GTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCT 857166
Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGC 52323
|| || || | || || || | ||||| | ||| | || || |||||
Sbjct 857165 GATCGA-CACATACATCAAGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGA 857107
Query 52324 ACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG 52383
| | || ||| | || ||||| | ||||| | ||||||||| ||||
Sbjct 857106 CCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGT 857047
Query 52384 CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCA 52443
| || | | |||||| || | || || ||| ||||||||| | || || ||||||
Sbjct 857046 CGACCTTTGGCGAGCGGCTGATAGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCT 856987
Query 52444 GCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCA 52503
|| ||| ||||||| | | || | | ||| | ||||||||||| || ||| ||
Sbjct 856986 CGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCA 856927
Query 52504 ACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGA 52563
||||| | || || || ||||| || |||||||| |||||||| || || || |
Sbjct 856926 ACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCT--- 856870
Query 52564 CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCT-GAGCATGTTCAAG--GAGGCGG 52620
||| | | ||| || || | | ||| | ||| | || | ||||| |
Sbjct 856869 CGCACCT---CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCG 856813
Query 52621 TGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG 52680
| | |||||| ||||||| | || | ||| ||||| | ||||| || |||||||
Sbjct 856812 TTGGTATCGAGCAGGAGTTCCTGACCGACGCCCTGCCCTGTGGTCTGCTCGGAATGAACG 856753
Query 52681 CGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC 52740
| || ||||||| ||||||| |||||||| || || |||||| |||| |||||
Sbjct 856752 CCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGGCA 856693
Query 52741 AGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800
| | ||| || |||| | ||| || || || || ||| | ||||| ||||| | |
Sbjct 856692 ACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCG 856633
Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGT 52828
||||||||||||| ||||||||||| ||
Sbjct 856632 GCAAGACCAACTTCTTCGAGAAGCGGGT 856605
>seq11
Length=586936
Score = 118 bits (130), Expect = 1e-21
Identities = 146/196 (74%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || ||| || ||||||||| || ||||| |
Sbjct 305846 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCG 305787
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || ||||| |||||||| || ||||| || ||||| ||| | || | || |
Sbjct 305786 AAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTC-CTGAATCTTGGACTTGAC 305728
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||| |||| ||||| ||||||| || | || || |||||||| || |
Sbjct 305727 GTTG-TCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTTCCAGTCAGGGTCT 305669
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 305668 TGACAAAGATCTGCAT 305653
Score = 91.5 bits (100), Expect = 1e-13
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | || | ||| | ||| | | | |||||||| || |||||||||||| |
Sbjct 305091 CCACCTCGGAGTCGGAGAACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 305032
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||||||||| || ||||||| | || || ||||| |||||||| ||
Sbjct 305031 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 304972
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | || | ||| || | |||||||| ||||| |
Sbjct 304971 ATTCCCTCCTTGTC-CTGAATCTTGGACTTGACGTTG-TCGATGGTGTCGGAGGACTCGA 304914
Query 138566 CCT 138568
|||
Sbjct 304913 CCT 304911
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||| | || || |||||| || || |||||||
Sbjct 306074 GATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCG 306015
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || ||||| |||||||| || ||||| || ||||| ||| || || |
Sbjct 306014 AAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACG 305955
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | ||||| ||||||| || | || || || || || || ||
Sbjct 305954 TTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTC 305895
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 305894 ACGAAAATCTGCAT 305881
>seq8
Length=911341
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | |||| ||| | ||| | | |||||||| || |||||||||||
Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||||||| || ||||||| |||| || ||||| |||||||| ||
Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || ||||| ||| || || | | || | |||||||| |||||||||
Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 549640
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || ||||| || || || || ||||||||||||||
Sbjct 549641 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687
>seq4
Length=2565013
Score = 98.7 bits (108), Expect = 1e-15
Identities = 143/201 (71%), Gaps = 1/201 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | ||| || ||||||||| || || ||||
Sbjct 110152 GACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCG 110211
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || || ||||| |||||||| || || || || ||||| ||| || || |
Sbjct 110212 AAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 110271
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| ||||||||||||| || | || || ||||| || || ||
Sbjct 110272 TTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 110331
Query 138601 ACAAAAATCTGCA-TGGCTTA 138620
||||| || |||| ||| |||
Sbjct 110332 ACAAAGATTTGCACTGGGTTA 110352
>seq1
Length=3339266
Score = 82.4 bits (90), Expect = 8e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 57303 CTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCGCT 57362
|| |||||| || | ||| || ||||| ||| ||| || |||| || ||||| | |
Sbjct 1310391 CTTGACGTTTCCGAGGTCACCAACGTGTCGCTCGGAGTCGGTGGGGGCACCGTGGTTCTT 1310332
Query 57363 GCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACTC 57422
| |||||| ||||| ||| || || |||||||||||| || |||| || |||||
Sbjct 1310331 CTTGAAGGGGTTGAAGTGGGGGCCGGCAGAAGTGCAGCCGTTGGTGTTGTCACCAAACTC 1310272
Query 57423 GTGAACGTGAAATCC 57437
||| ||||| |||||
Sbjct 1310271 GTGGACGTGGAATCC 1310257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262145665520
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