Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 196 5e-45 seq4 141 9e-29 seq11 107 2e-18 seq8 107 2e-18 >seq3 Length=2716294 Score = 196 bits (216), Expect = 5e-45 Identities = 408/600 (68%), Gaps = 21/600 (4%) Strand=Plus/Minus Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGAAGC- 47037 ||||||| |||||| |||| || || || || | |||||| ||| || ||| Sbjct 857192 CATCCACTCGGAAACGTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAGGAGCG 857133 Query 47038 AAGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGG 47097 || | || || || |||| |||||| ||| |||||| | | |||||||| |||| Sbjct 857132 AACCTAC-CTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGG 857074 Query 47098 CCATGAAGTACATTGAAAACGAAAACGTC-ACTCTGGCCGAACGTTTGATCGCTTTCGCC 47156 | | |||| || |||| | ||| || | | ||| || |||| ||||| ||| Sbjct 857073 CGCTCAAGTGGATCTCCGACGACGA-GTCGACCTTTGGCGAGCGGCTGATAGCTTTTGCC 857015 Query 47157 ATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAA 47216 |||||||||| |||||||||| ||| || || | || || | | || | | Sbjct 857014 GCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGA 856955 Query 47217 GGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCAC 47276 || | |||||||||||||| || ||||||||| ||||| ||||||| || |||||| Sbjct 856954 GGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCAC 856895 Query 47277 ACCAACTTTGCCTGT---CTCTACT-ACAACACTAGAGTCGA---TCAAAAGTTGGACGT 47329 ||| ||||||||||| |||| || || | | ||| ||| || || || | Sbjct 856894 ACCGACTTTGCCTGTCTGCTCTTCTCGCACCTCGAGAACCGACCCTCCAA-----GAAG- 856841 Query 47330 GCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGA 47389 | ||| ||| || ||| ||| ||||| | || ||| |||||| | |||| Sbjct 856840 ----ATTGTCGAGGACGTGATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGA 856785 Query 47390 GGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATT 47449 || |||||| | | | ||||||||||| || | ||| | ||||||| || || Sbjct 856784 CGCCCTGCCCTGTGGTCTGCTCGGAATGAACGCCAAGCTCATGTGCCAGTACATTGAGTT 856725 Query 47450 TGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCC 47509 |||||||||||| ||||| ||| || | ||||| | ||| || || || || Sbjct 856724 TGTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACCC 856665 Query 47510 ATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 47569 ||||| || ||| | ||||| ||||| | |||||||||||||| ||||||||||| || Sbjct 856664 CTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 856605 >seq4 Length=2565013 Score = 141 bits (156), Expect = 9e-29 Identities = 315/462 (68%), Gaps = 13/462 (3%) Strand=Plus/Minus Query 145756 GTGCGCAGATAGTACATGCCGGTCTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTC 145815 || ||||| |||||||| ||||||||||| |||| ||| ||| ||||| ||| Sbjct 2495608 GTTCGCAGGTAGTACATACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATG--- 2495552 Query 145816 GACATGACCGAGTAC---GTGGGTTCGGCGACAAACAAATTTAGAGATTGGCTCTGATCA 145872 || ||| | | | ||||| || || | || || || ||| ||| ||| Sbjct 2495551 GAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGTGGATGTTGAGGGACTGGGACTGGTCA 2495492 Query 145873 ATGAAAGGAGCCCGGTCGGCGGCCATGTCTATCATGCACTT-TGATTTAATTTCCCATGC 145931 ||||| || | |||||||| ||||| || || || | ||| ||| ||| ||||| | Sbjct 2495491 ATGAAGGGGGATCGGTCGGCAGCCATCTCGATGATTCGCTTCTGAGA-AATCTCCCACAC 2495433 Query 145932 GGTTTTAAAGAGATCCTTGACGTGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATT 145991 ||| || | || ||||||| | |||||| || | | ||||||||||| || || || Sbjct 2495432 GGTCTTGTACAGGTCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTT 2495373 Query 145992 TTCGGCCAATATTTTGTTGCGCAATTCTGGAGTGTAAATGTTCAAG-TCTACGAGGGCCT 146050 ||||||| ||| ||| || | | || | | ||| || || ||| ||| Sbjct 2495372 GTCGGCCACGATTCGGTTCTTCA-TGGTCTCGTTCCACAGACCAACCTCAACCAGGTCCT 2495314 Query 146051 TGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGA-TACACG 146109 ||| || | ||||||| | ||| ||||| || || || || || | ||| || | | Sbjct 2495313 TGAGCAGCCAGGGGTTGACAATCTGGAACTCACCAGCAAGCACTCGTCG-AGAGTAAATG 2495255 Query 146110 TTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTA 146169 ||| |||| | |||||||| |||||||| ||||| ||||| | || | ||||||| Sbjct 2495254 TTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAAGTGGAAGCGGTA 2495195 Query 146170 GGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTGTCTT 146211 |||||| |||||||||| ||||||| || ||| ||||| Sbjct 2495194 GGCATGGGGGCCACCAGCAGCGAGTTTCGCATTCCG-GTCTT 2495154 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/163 (74%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| | |||| ||||||||| || || || |||||||||||| Sbjct 110191 TCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 110250 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| || | |||||| | | ||| || |||| ||| | Sbjct 110251 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 110309 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTA 127119 || ||||| || || || || ||||| || |||| ||| ||| Sbjct 110310 GGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTGGGTTA 110352 Score = 84.2 bits (92), Expect = 2e-11 Identities = 201/297 (68%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 147267 GGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGC--AGGAAACACGAACAC 147324 ||| | |||||||||||||||| ||| ||||| ||| ||| ||||||||||| || Sbjct 2494079 GGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATG--TTGACAAGGAAACACGACGAC 2494022 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACGTGC-C 147383 || ||||| | || || || |||| || ||| ||||| ||||| || | Sbjct 2494021 ATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAA-GTACTT 2493963 Query 147384 CAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAG 147443 || ||| | | || || |||||||| | || || |||||||| || | | Sbjct 2493962 TTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGAC 2493903 Query 147444 GGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAG 147503 | || ||||||| ||| ||||||||||| || |||| || | |||||| | || Sbjct 2493902 AGACACTCGCATGATCATCTGCTGGGGTCGCTCGGCAACAGCGCCGTTGACTCGCAGCAG 2493843 Query 147504 ATATCCATTGGT-CAGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559 || | | | | ||| || ||||| |||||||| |||||| | |||| | || || Sbjct 2493842 GTAGGC-TCGCTCCAGGGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGT 2493787 >seq11 Length=586936 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | |||| ||| | |||||||| || || || ||||| ||| | Sbjct 305879 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 305820 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || |||||| |||| | ||||||||| || || || Sbjct 305819 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 305760 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| |||| || | ||| || | ||| || Sbjct 305759 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG-TCAATGGTATCGGAGGACTCAAC 305701 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || ||||| || || ||||| |||||||| Sbjct 305700 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||| | ||| | || | || || || || || || ||||| ||| Sbjct 306107 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 306048 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| |||| | ||||||||| || || || Sbjct 306047 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 305988 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| ||||| ||| ||||| | | |||||| Sbjct 305987 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT-CGATAGTGTCAGAAGACTCGAC 305929 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||| || || || || ||||||||||| Sbjct 305928 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 305881 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || |||||| | || | ||||||||| || || || || |||||||| Sbjct 305248 ATCCTCAAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATACCCTCCTT 305189 Query 127018 GTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 |||| ||| || ||||| ||||| ||| ||||| | ||| || |||| || | Sbjct 305188 GTCCTGGATCTTGGACTTGACGTTGT-CGATAGTGTCGGAGGACTCAACCTCGAGAGTGA 305130 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || ||||||||||| Sbjct 305129 TGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 305093 >seq8 Length=911341 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | ||| | || ||||| || || || ||||| || Sbjct 549461 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 549520 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| |||| | ||||||||| || || || Sbjct 549521 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 549580 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| |||| |||||| | | ||| || Sbjct 549581 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG-TCGATGGTGTCGGAAGACTCCAC 549639 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || ||||| || || || |||||||||||||| Sbjct 549640 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 549687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500556305840