Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01] 41 sequences; 21,824,367 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 260 2e-64 seq4 221 2e-52 seq2 159 6e-34 >seq3 Length=2716294 Score = 260 bits (288), Expect = 2e-64 Identities = 582/864 (67%), Gaps = 15/864 (2%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | ||||| ||||||||| |||||||||||||| ||| || || Sbjct 856589 CTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTT 856648 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAAT-CCGAGAGCCGCCA 159746 |||||||| |||| ||||| | || ||| ||| ||| | |||||||| ||| Sbjct 856649 CTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTT-GGAGTTGCCGAGAGCAACCA 856707 Query 159747 GCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA 159806 ||| | ||| || ||||| || ||||| ||||| ||| ||| || || |||| Sbjct 856708 GCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCA 856767 Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 | | | ||| || || || | ||| ||||||| ||| || | || || ||| |||| Sbjct 856768 GACCACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCG---ACAA 856824 Query 159867 TC---TGCGAGACACGTTCGTACCCCGGCTTGCCCAAAAT-GTGGTCCTTAAACAGGAGG 159922 || | | |||| || | | || | | | | ||| | || || || Sbjct 856825 TCACGTCCTCGACA--ATCTT--CTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGA 856880 Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || ||||||||| |||||| |||||||| || ||||||| ||||||||| | | ||||| Sbjct 856881 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 856940 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||||| || ||| |||||||| || |||| || || | ||| || ||| Sbjct 856941 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAG 857000 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 || ||||| ||||| ||||| || | |||| ||| ||||| | | | | ||| | Sbjct 857001 ATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAG 857060 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 ||||| | ||||| || |||||||| |||||| || ||| ||||| |||||| Sbjct 857061 ATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 857120 Query 160163 AACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACAT 160221 |||| | || | ||||||| |||||||| || | |||||| ||||||| | Sbjct 857121 AACAGGTAGGTTC-GCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGT 857179 Query 160222 TTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATA 160281 ||| | ||| | || || || ||||| ||| |||||| | | ||||| | Sbjct 857180 TTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGAC 857239 Query 160282 CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341 ||||||||| | ||| | | |||| || | || || | || |||| || || Sbjct 857240 CTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGC 857299 Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401 |||||| |||| |||||| |||||||| | |||||| |||||||| | || ||||| Sbjct 857300 AAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCA 857359 Query 160402 GTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGT 160461 || || ||| | | | | ||||| ||| || ||| |||| | ||||| || | Sbjct 857360 GTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTT 857419 Query 160462 TTTGTACATGGCCCAGATGGCGTG 160485 |||||||| |||||| |||| Sbjct 857420 CTTGTACATCTGCCAGATCTCGTG 857443 >seq4 Length=2565013 Score = 221 bits (244), Expect = 2e-52 Identities = 341/480 (71%), Gaps = 10/480 (2%) Strand=Plus/Minus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 |||||||| |||| | | |||| | || ||| ||| |||||||| |||||||| || Sbjct 2495638 GTGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGA 2495579 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||||||| ||| ||||| | ||||||||||| || |||| || | ||||||| ||| Sbjct 2495578 CCCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATG 2495519 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028 || ||||| || |||||| ||||| ||||| || | || || || ||||| | ||| Sbjct 2495518 TGGATGTTGAGGGACTGGGACTGGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGATG 2495459 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCACA 204088 || |||||| |||||||||||||| |||||| ||| ||| || | | || || | Sbjct 2495458 ATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATG 2495399 Query 204089 TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC---TCATCCTCGTCTCCTC 204144 | | | || ||| | || ||||||||||||| | || || || | ||||| | Sbjct 2495398 T-TGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATTCGGTTCTTCATGGTCTCGT- 2495341 Query 204145 CCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203 ||||| | ||||||| | ||| ||| | ||| |||||||| ||||| || | Sbjct 2495340 --TCCACA-GACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACT 2495284 Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263 | || | ||||| | ||| | | | | |||| |||| | || ||||| ||||||| Sbjct 2495283 CACCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGA 2495224 Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323 ||||| |||||||| ||| || || |||||||| |||| ||||| ||||| |||| Sbjct 2495223 AGCCGAGAATCTGAGAAGTGGAAGCGGTAGGCATGGGGGCCACCAGCAGCGAGTTTCGCA 2495164 >seq2 Length=3147093 Score = 159 bits (176), Expect = 6e-34 Identities = 507/771 (66%), Gaps = 30/771 (4%) Strand=Plus/Minus Query 203836 CGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 ||||||||| || |||||||| ||||| | || || | | ||| |||||||| Sbjct 1305634 CGTCTTGTCGACTGTGAACTGGATGGCTGCTGCTGCGGGGGGCGTACGCAGGTAGTACAT 1305575 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| || || |||||| | | ||| |||| | ||||||| | | ||||| ||| Sbjct 1305574 GCCTGTTTTGAGGCCCATTTTCCAGCCGTGGAAATGCATGGCTGTGATTTTGC---CGTG 1305518 Query 203956 GGGG---TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 || | ||| |||| |||||| || ||||| ||||| ||| | ||||| ||| | Sbjct 1305517 GGTGATTTCGCGCATGAAAATGTTGAGCGACTGCGACTGGTCAATGTAGGGCGCTCGAGC 1305458 Query 204013 TGCGGCCATATTGATAATGGTCTTCTG--CGAAATCTCCCACACCGTCTTGAACACGTCT 204070 |||||||| | ||| || |||||| | || ||||| | || | ||||| | Sbjct 1305457 AGCGGCCATGTCGATGATA--CTTCTGGCCTTGATTTCCCAGGCGGTTCGGTACACGGCC 1305400 Query 204071 CTGGTGTGTTGAGGCACATCTTCCC-ACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC 204128 | | ||| || || | ||| | | ||| ||||||||||||||| || | || Sbjct 1305399 CGGATGTTTTCGGGGA--TCTGGGTGATGGACTGGATCGAGCCGTTGTCGTGGATGATTC 1305342 Query 204129 TCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGT 204188 || || ||| ||| ||||||||||| | |||| || ||| || ||| | ||| Sbjct 1305341 GGTTCTTCATCTGCTCGTTCCACATGCCCAGCTTGATGAGATCCTTCATCAGCCAGTGGT 1305282 Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248 ||| || | || || || | | || | || | | | |||| |||| |||| | Sbjct 1305281 TGACGACGAGGAACTCGCCTGCTTGAACTCGACGAAGGTAGATGTTGGAGGTGTATGGCT 1305222 Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308 |||| |||||||| ||||| |||||||| ||| ||||| ||||| ||||||| | Sbjct 1305221 CGAAACACTCGTTGTGGCCGAGAATCTGAGACGTGGAAGCCGTAGGCATAGGAGCCACCA 1305162 Query 204309 GCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA 204368 |||| |||||||||| ||||| || | || ||| || | |||||| || Sbjct 1305161 GCAGCGAGTTGCGCATACCGTGCTTGGCAAGGTTGGCCTTGAGCAGCGACCAGTCCCACA 1305102 Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATG--CCTTGACTGACTGGGCT 204426 | ||| || | ||| | || ||||| ||| || ||||| || | || || Sbjct 1305101 GATCCGAGGGAGTCTTGTTCCAGAGATCAAACTG-AAGCTGACCCTTG-CTTGCAGGACT 1305044 Query 204427 GCCCTTGTACGTCGGATAAGG---CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGC-CA 204482 ||||| ||||| | ||| || | || ||| ||||||||| | || || | || Sbjct 1305043 GCCCTCGTACGACTCATACGGTCCCAGA---TCTGCTGCCAGCTCGATGGACGCTTCGCA 1304987 Query 204483 TG--GCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTCCGTTCC 204540 | ||||| ||| |||||||| ||||| | ||||| | | ||| ||||| | | Sbjct 1304986 GGCAGCGTG---GTAGATGGTCTCGAAGATGAGCACGTTGAGTTCGGCAGCCTCAGGACT 1304930 Query 204541 GTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCC 204591 ||| | | || | ||| | ||||||||| |||| ||||| ||||| Sbjct 1304929 GTCGTAGGGCATGCGCAGTTTCATAAACACGTCTGCCAGTCCCTGAACTCC 1304879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154792482960