Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4 154 2e-32
seq11 129 7e-25
seq8 120 3e-22
>seq4
Length=2565013
Score = 154 bits (170), Expect = 2e-32
Identities = 172/227 (76%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | |||| || || |||| || |||||| ||||| |||||||| ||
Sbjct 110119 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 110178
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| |||||||||||||||||||| |||| ||||||||||| | ||
Sbjct 110179 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 110238
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545
| || |||||||||| |||||| ||||| ||| | | | |||||| || |||||
Sbjct 110239 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCAC 110297
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCA 46592
|| | |||||||| ||||| || || || || |||||||||||||
Sbjct 110298 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 110344
>seq11
Length=586936
Score = 129 bits (142), Expect = 7e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | ||| |||||| ||||| ||||||||||| ||||| || |||| |||
Sbjct 305861 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305802
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| || | ||||||||||| | || | | ||||||||||
Sbjct 305801 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 305742
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | || ||| || || || || | |||||||| ||
Sbjct 305741 ATCTTGGACTTGA-CGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTT 305683
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || |||||||| |||||
Sbjct 305682 TCCAGTCAGGGTCTTGACAAAGATCTGCAT 305653
Score = 105 bits (116), Expect = 8e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| || || || |||| || |||||||| ||||||||
Sbjct 306071 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 306012
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | ||||||||||| | || | | |||||||||| |||||| ||||| |||
Sbjct 306011 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTT 305953
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| || || || || | |||||||| || || || || || || ||
Sbjct 305952 GTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCAC 305893
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 305892 GAAAATCTGCAT 305881
Score = 100 bits (110), Expect = 3e-16
Identities = 102/133 (77%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || |||||| ||||| ||||||||||| ||||| || |||| |||
Sbjct 305073 ACCAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 305014
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| |||||||| || | ||||||||||| | || | | ||||||||||
Sbjct 305013 AGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 304954
Query 46505 ATCTTCTTCTTGA 46517
||||| |||||
Sbjct 304953 ATCTTGGACTTGA 304941
>seq8
Length=911341
Score = 120 bits (132), Expect = 3e-22
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||| || || || || ||
Sbjct 549473 CGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG 549532
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||| |||||||| || | ||||||||||| | || | | |||||||
Sbjct 549533 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 549592
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 549593 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 549651
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTT 46595
|| || || || || || || ||||| || |||||||
Sbjct 549652 AGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 549689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238110315320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |