Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20keelungensis_20[genbank_20GCA_5F001600195.1_202016-03-01]
41 sequences; 21,824,367 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 408 4e-109
seq4 123 2e-23
seq11 120 3e-22
seq8 111 2e-19
>seq3
Length=2716294
Score = 408 bits (452), Expect = 4e-109
Identities = 654/928 (70%), Gaps = 17/928 (2%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| ||||| || || || ||| |||| ||||| || || || || || || |
Sbjct 856577 CATGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 856636
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
|| || ||| | ||| || || |||||||||| | ||||||| ||||| ||||
Sbjct 856637 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCC 856696
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || | || ||||| | |||||| || ||||| ||||| || ||||| | || ||
Sbjct 856697 GAG-AG--CAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGC 856753
Query 132767 AATTAAGTCCCAGCAGACGCACCGG-CAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
|| | ||| ||||||| ||| || ||| || ||||| || || |||||||| |
Sbjct 856754 G-TTCATTCCGAGCAGAC-CACAGGGCAGGGCGTCGGTCAGGAACTCCTGCTCGATACCA 856811
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885
|| || ||| | | ||| || | | | || || | | | | ||| |
Sbjct 856812 ACGGCCTCGACAATCACGTCCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGAG 856871
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
|| | || || ||||||||| |||| |||||||| | ||| ||||| |||||| |
Sbjct 856872 AAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 856931
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| || | |||||||||||| || || || |||||||| || |||| |||||| |||
Sbjct 856932 AAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCG 856991
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065
|| ||||||| |||||||||||| || ||||| | ||| |||||||| || || | ||
Sbjct 856992 GAGAAGAAGATGCCCTCGACGGCGGCAAAAGCTATCAGCCGCTCGCCAAAGGTCGACTCG 857051
Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
| | || |||||| |||||||| |||||||| | |||| ||| || || || |||
Sbjct 857052 TCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCG 857111
Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGG 133183
|||||||| ||| | | || ||| || | || | | ||| |||||||| ||
Sbjct 857112 ATGGCGTTGAAC--AGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCA 857169
Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243
||| ||| |||||||||| | ||||||||| ||| || |||||||| |||||| |
Sbjct 857170 GCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGG 857229
Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303
||||| |||||||| || | ||| ||||| ||||| || ||||| || || || |
Sbjct 857230 CCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCAT 857289
Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363
|| || || || ||||||||||||||| |||||| ||||||| || ||| | |
Sbjct 857290 CGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCC 857349
Query 133364 G---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420
| ||||||||||| | |||||||| || || | ||||||| ||||||| || || |
Sbjct 857350 GGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAG 857409
Query 133421 CCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACC 133480
||||||| || |||||||| ||| || || || || ||||| || | ||||||||
Sbjct 857410 CCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACC 857469
Query 133481 GGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
||||| |||| || | |||||||||
Sbjct 857470 GGCGGTGGTTCTCCTTGAGCAGCGGCTC 857497
>seq4
Length=2565013
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || || || ||||| ||||||||| |||| || ||| | |||
Sbjct 110344 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 110285
Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
||| | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 110284 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 110226
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| ||||| ||||| || |||| || || || |||||||||
Sbjct 110225 CAGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAAC 110166
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| | || |||||
Sbjct 110165 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCG 110131
>seq11
Length=586936
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || ||||||||| |||| |||||| | |
Sbjct 305881 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 305940
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| || ||| | |||||
Sbjct 305941 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 305999
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || |||| || |||||| |||||||||
Sbjct 306000 GCAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAA 306059
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| |||||| | || || || | ||||| || | |||| ||||
Sbjct 306060 CATCCAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGAGGTGGCC 306109
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||||||| |||| || ||| || ||
Sbjct 305653 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 305712
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || || | ||||| ||||| |||||| | |||||
Sbjct 305713 GATACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCA 305771
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || |||| || || || |||||||||
Sbjct 305772 GCAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAA 305831
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| |||| || ||
Sbjct 305832 CATCCAGAAGGAGTCTACTCTCCATCTGGTCCTCCG 305867
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||||||| | ||||| ||||| ||||||| ||| || || ||||| ||
Sbjct 304958 GACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAG 305017
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| || || || ||||||||||||||| ||||| | || || ||| |||| ||
Sbjct 305018 GACGGACGAACTCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTTCATCTGGTTCTC 305077
Query 38457 CG 38458
||
Sbjct 305078 CG 305079
>seq8
Length=911341
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301
||||||| || || || || || || || || || || |||||| | || || ||| |
Sbjct 549689 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 549630
Query 38302 CCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | |||| | || || |||| ||||| |||||||||||| | |||
Sbjct 549629 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 549571
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| || || ||||| || |||| || ||||| ||||||
Sbjct 549570 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 549511
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| | || || ||| | || |||||
Sbjct 549510 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 549473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172543661440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |